Gene Dtox_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0489 
Symbol 
ID8427424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp500421 
End bp501581 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content35% 
IMG OID645032860 
Producthistidine kinase 
Protein accessionYP_003190038 
Protein GI258513816 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00661099 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAAGTG AGAGAGATAA AAGAAGGAAT GATTATACAA AATTAAAAAG GAAAGTATTT 
TTTCGAATGC TCCTTATTAT TTTTACCACA GCTGCAACTG TTATCTTCCT GCGTTTTGTA
ATTCAAAAAA ACTTCAGTGT TGGAGATAGT ATTGTACAAT TTTTAAAGAA TACGTTTCAT
ATGCGTGACA GAGATGCTTT GATAATGTAT CGGTTTGCAT TTTTTAATAA TATAGAAGCT
ATTACACTTA TTGTGATTCT CATATTCTTA GTTATTTTGC TTAAATTTTC ACTTTCTTGG
TTTACTAAAT ATTTCGATGA AGTCAGCGCT GGAATGGATA AACTTACTGA GGAATCCGAT
GCTGGAATTA CATTATCACC GGAATTGGAT TTTATGGAAA ATAAGCTTAA TCAGATAAAA
AACAACTTGG AAAAACAAAA GAAAGCTGCT CTTGATGCCG AGCAGCGCAA AAATGATTTG
GTAGTTTACT TGGCTCATGA TATAAAGACA CCTCTGACCT CTGTTATAGG ATACTTAAGT
CTTCTGGATG AAGCTCCTGA TATGCCTCCT GAACAGAAGG CAAAATATGT CGGTATTACC
TTGGAAAAAG CTTATCGATT AGAGCAGCTT ATAAATGAGT TTTTTGAGAT CACAAGATTT
AATCTTCAAA CTATTGTTTT GAATAGAGAA AAAATTAATT TACTGTTTAT GCTCCAGCAG
ATGGCAGATG AATTCTATCC AATACTGACT CCACAGGAAA AGCGGGTGTC CGTCAATGTG
CCTGATGGCC TCATTCTGTG GGGAGATGCT GACAAACTGG CTCGTGTGTT TAATAACATT
CTGAAAAATG CGATAGCTTA TAGCTATGAA AACAGCGTCA TTGACATTTC TGCTAAACAG
CAGGAGAAAA ATATTGTTAT AACTTTTAAT AATCAAGGTA ATCCTATCCC ACGAGAAAAA
CTGGAAACGA TATTTGAGAA ATTTTTTCGG CTGGACACAT CCCGTTCTAC TAATACAGGC
GGTGCCGGGC TTGGACTGGC TATTGCCAAA GAAATCGTAA ACGCGCATGG AGGCAATATT
TTCGTGCAAA GTAATACAGA AAAGACAGTC TTTACTGTCG TGTTTCCACA AAAGCAAGAA
AAGGACAAGT TATCTGCTTA A
 
Protein sequence
MKSERDKRRN DYTKLKRKVF FRMLLIIFTT AATVIFLRFV IQKNFSVGDS IVQFLKNTFH 
MRDRDALIMY RFAFFNNIEA ITLIVILIFL VILLKFSLSW FTKYFDEVSA GMDKLTEESD
AGITLSPELD FMENKLNQIK NNLEKQKKAA LDAEQRKNDL VVYLAHDIKT PLTSVIGYLS
LLDEAPDMPP EQKAKYVGIT LEKAYRLEQL INEFFEITRF NLQTIVLNRE KINLLFMLQQ
MADEFYPILT PQEKRVSVNV PDGLILWGDA DKLARVFNNI LKNAIAYSYE NSVIDISAKQ
QEKNIVITFN NQGNPIPREK LETIFEKFFR LDTSRSTNTG GAGLGLAIAK EIVNAHGGNI
FVQSNTEKTV FTVVFPQKQE KDKLSA