Gene Dtox_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0448 
Symbol 
ID8427383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp464202 
End bp465065 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content47% 
IMG OID645032824 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003190002 
Protein GI258513780 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.144364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAGC TTGTTACAGT ATTTACAAAT TGTAAAGAAA CATTAAAGAG CAACCGAATG 
CTGTCAAGCA GTGCCACAGT AGTTGTGTTT ATCTTTCTGT TAGCCCTGGC GGGGCAATGG
ATTATGCCAC ACGATCCGGC AGCGGTAAGC CTCGCCGATA AGGTACAGCC ACCCTCTTTT
AAATATCCTT TTGGTACAGA TTCGCTGGGC AGATGTATAT TTAGCAGGGT AATTGAAGGG
ACACACACGT CTTTAAGTAC AGCGGCCATA GTTGTAGCTA TCAGTGGCAT TAGCGGAGTA
TTAATCGGAC TGATATCAGG TTATTTCGGA GGAATTCTGG ACAGCCTGAT TATGCGTACT
GTCGATGTTA TGCTTGCTTT CCCGGGGATT ATCCTCTCCC TGGCTCTGAT TGCAGCAATA
GGTCCGGGCC TGAGCAGTAT AATCATTGCC TTAACGATGG TGCACTGGAC CGGATATACA
AGGCTTATCA GAGGCGAAGT TCTATCAGTT AAACAGTCAG AGTTTGTGGA AGCGGCAAGG
GCCATGGGCA ACAGCCAAAT CAGTATTATG TTTAAATATA TTTTACCCAG TATAGTAACT
CCAGTAATAG TAATGGCTGC CCTGGACATA GCTCATGTGG TGCTGGCCGG GGCAAGTTTA
AGCTTTCTTG GGCTGGGCGC CCAGCCCCCT ACCGCAGAAT GGGGAGCAAT GATTAACGAA
GGACGCGAGT TTATCCGGAC AGCTCCACAT ATTACCCTGT TTCCCGGACT GGCTGTGATG
ATAACCGTTC TGGCTTTTAA TATGCTGGGG GACAGCTTGA GAGATGTCCT TGACCCCAGA
CTGCGCGAAG GGCAGATAGA ATAA
 
Protein sequence
MKELVTVFTN CKETLKSNRM LSSSATVVVF IFLLALAGQW IMPHDPAAVS LADKVQPPSF 
KYPFGTDSLG RCIFSRVIEG THTSLSTAAI VVAISGISGV LIGLISGYFG GILDSLIMRT
VDVMLAFPGI ILSLALIAAI GPGLSSIIIA LTMVHWTGYT RLIRGEVLSV KQSEFVEAAR
AMGNSQISIM FKYILPSIVT PVIVMAALDI AHVVLAGASL SFLGLGAQPP TAEWGAMINE
GREFIRTAPH ITLFPGLAVM ITVLAFNMLG DSLRDVLDPR LREGQIE