Gene Dtox_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0444 
Symbol 
ID8427379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp459581 
End bp460555 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID645032820 
ProductABC transporter related 
Protein accessionYP_003189998 
Protein GI258513776 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.060153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATAC TGAAAAATAT CAATAAAACA TTTAGGATAG CAAAACGAAA GTCTGGATTT 
GGACAGGCAT TTAAAGCGCT TTTCTCACGC GAATACGAAA CTGTTCATGC TCTCAGTGAC
GTGAGTTTCA CAATCAACGA CGGCGAAATG ATTGGTTACA TAGGTCCAAA TGGGGCGGGA
AAAAGCACCA CGCTTAAAAT CATGTGCGGC GTCTTGACAC CCGATAACGG CTCATGCAAG
ATTGACGGAC GCACACCATG GCAGGATAGA ATTGAGCACA CCAAAAACAT TGGCGTTGTT
TTCGGTCAGC GCAGCCAGTT ATGGTGGGAC GTACCTGTAT GTGACAGCTT TGAGCTTATC
CGCGATATTT ACAAGGTGAA TAAAACGGAA TACAGACACA ATCTTGATGA GCTTGTCGAA
CTGCTCGATC TGTCGGAGCT TCTGAAAACG CCGACACGCA GTCTCAGTCT TGGGCAGCGT
ATGCGGTGCG AACTGGCCGC ATCATTACTG CACAGTCCCC AAACACTCTT TTTAGATGAG
CCGACCATCG GGCTGGACGC TGTCTCTAAA ATCGCGGTAC GGCAGTTCAT AAAAAAACTC
AATACTGAGC GCGGCACGAC TGTCATACTG ACAACTCACG ACATGCAGGA CATTGAAGCA
TTGACGGAAC GAATTTTACT GATCGGCAAG GGACGTATAT TGCTGGACGG AAGCTTGCTG
GAGTTAAAAA AGCATTTTTC CACTCGAAAA ACGGTTGTTT TTGAATACAA TGGCGAAGTT
TCAAAGCTTT GTGACGGGAT GACCGTGACT GAACAGAAAG AAGGAAGATT GATAATTGAG
CTTGACCCGC TCATATGCTC CGTGTCAACC GCGATAGCAC ATCTATCATC GCAAGTAGAA
GTGCTTGACA TTTCAGTTTC TGGTATCAGC GCCGAGGAAA TGGTAGCGGT CCTGTATAAG
GAGTACCGCA TATGA
 
Protein sequence
MIILKNINKT FRIAKRKSGF GQAFKALFSR EYETVHALSD VSFTINDGEM IGYIGPNGAG 
KSTTLKIMCG VLTPDNGSCK IDGRTPWQDR IEHTKNIGVV FGQRSQLWWD VPVCDSFELI
RDIYKVNKTE YRHNLDELVE LLDLSELLKT PTRSLSLGQR MRCELAASLL HSPQTLFLDE
PTIGLDAVSK IAVRQFIKKL NTERGTTVIL TTHDMQDIEA LTERILLIGK GRILLDGSLL
ELKKHFSTRK TVVFEYNGEV SKLCDGMTVT EQKEGRLIIE LDPLICSVST AIAHLSSQVE
VLDISVSGIS AEEMVAVLYK EYRI