Gene Dtox_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0436 
Symbol 
ID8427371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp448277 
End bp451957 
Gene Length3681 bp 
Protein Length1226 aa 
Translation table11 
GC content45% 
IMG OID645032812 
ProductS-layer domain protein 
Protein accessionYP_003189990 
Protein GI258513768 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.13752e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCATAACA ATAGACTATT TATTGTCGTA CTAATCATAT ATATGCTTCT AATCTTTACG 
GGTTACGCAG TAGCTGCCGA ATTTTCCGAT ATATCCGGCC ATTGGGCCCA AGGACAAATT
AATAAATGGG CCGAAAAAGG CTTGGTCAGT GGTTACCAGG ACGGAACATT CAAACCTAAC
AACCAAATCA GCCGAGCTGA ATTTGTAGCC ATGATCAACC GTGCCTTTGC CATTGACAAG
GGCAATACCA CCGCCGATTT TACCGATGTT AAACCCGGTA AATGGTATTA CGAAGAGGTG
ATTTCAGCCA AAACAGCAGG ATATATCGGC GGCTATGTCG ACGGCACATT CAAGCCTGAC
CAAACCATCA CCCGTCAAGA GGTAGCCAGT ATATTAGTCA GACTGCTAAA AATTAACCCG
TCTATCGAAG GACTGGCCAA ATTCGGCGAT GCCGGCCAGA TTCAGGAATG GGCCAGGGGC
AGCGTTGGCG CAGCTGCCAA GGCCGGTTTA ATGAGGGGCA TGCCCGACAA CACCTTTAAA
CCGATACGGA GCATCACCCG GGCCGAAGCC GTGGTTTCCC TGCACAACGC TTTGGCATAC
GCATCGGGCG AACCAAAAAC CGTGGAGGAA CCAAAAACCG TAGTGGGAAC TACGTTGGAA
GGTACAGTAA CCCTTGACGG CAGTGCTTTA GATAAAGTAG TGGTGCGGAT TTTTGCCGCC
GACAGCCATA AAGTACTAAA AGAAGTTCAA ACTGATAATC AGGGTTACTT CAAAGCCGAA
TTAAAAGCCG GTTATTACGA CATAACTGCT ACCACCGACA GTGCGGTTGC TTATAAAGCC
GACGTTAATA TCGTTGAAAA CAAGATTGCG GAAATTAACC TAAACCTTGA AGACGCGGCT
ATCGTAAAAG GTATCTTGAA AGACAACAAT GGCCGGGCAG TAAAAAATGC CACTATCTTA
TTCACCACTA ACCCAACCTT CATTACCTCC ACCAACATAA ATGGTGAATA TACCATAGCG
GTTATGGCTG ACAGGACCTA CACTGTCCGT GCTTATGAAC AAATCCATAA CGATAAGGAA
CCCAGCGTTG TGACCAGCAG TCAGCATGTC GGTTCCGCCG GTACCCAGAA TATTGGTACT
CTTAAGGCTC CCTTCACCCT GGCCTACACC GGTGGCAGCA GTGGTGGTGG TAGTAGTTCC
AATACCCAAA TTATATCAAT AAATACCATT GACAACTTAT CTATAATCAA CGGGTCAACC
GGCCAAAAAA CTATTACCAC CAGCCCCACA GACGTTACGA TTAAGGCTTT CAGCAGCAGC
GAACAAGTAG CCGGTGTAAC CGTTTTGAGC AAAACAATGA CAATTAGTGC TAATGAGGCC
GGCAATGCAA CAATTACCGT GACTGCTGAA AAGTCCGGTT ATGAAAGTAC AACCCGAACT
TTCACGGTTA ATGTAATAGA GAAAGATAAA TCAATACCGC TGGACAATCC GGTAATAATT
CCGGAAGATG CAAAGAAACT GGAATTTACA AATGGCGTTC AATTGGACTT TTCCGTGATT
ACCATTCCCG CTGAAAACAC GTTGACCGTT ACAGAACTAA GCGACAGTGA TTATGAGGTA
CCCTCTGTTC AGGAAGGTCA GGTATTTAAA ACCGCCGGGA AAGTTGTCAA AATAGAGCTT
CAGGGCAATG TAGACCTCAA TAAAGGTGTA AATTTGGTAC TGCCATTTGA AGGTGACCCT
GGCGCTGACC TGGCAATTTT CTACTTTGAC AACGGCGAAT GGAAATATAT GGATTCGATT
GTGGATGTAT CTAATAAAGT TATTCAAACC ACTGTTTATC ATTTTTCCAA TTGGGCACCG
TTTAAAGCTT CGCAGGTTGC TAAACCGGAA GCGAGCACCG CATCCGGGGA AATAGAAAAG
GGCACAAATG TTAGTTTAAC AACAACTTCA GAAGGTGCAA CCATCTACTA CACAACTGAT
GGGACTGTTC CGACAATTAG AAGCAGCAAA TATACCGGAC CGATTGGCAT AAACAGTAAC
CTGACCATTA AAGCCATTGC TGTAAAAAGT AATATGAGGA ACAGTGATGA GGCGACATTC
GAGTACACCG TTACTGAAGT CCCCGTAACC GGTATAGATG TCAGTTTGGT AAAGATGGAC
TTAACAGTAG AAAAAACTCT TGAGATAGAC GCAACAGTGA TTCCTGAAAA CGCAACAAAT
AAAAATGTAG CTTGGACTTC AAGCAATGAA GAAGTAGCAA CTGTAAGTAG CAGCGGTTTA
GTAACAGGAG TGGGTGTAGG CGTCGCAACT ATCACAGCAA CTACGAAAGA TGGTGGATTT
GCGGCAACCT GCGAGGTCAC CGTAACGGCG GCATCTCCCC AAACTCCTGT GGAATTGGAA
ATCATCTGTT CCTCTGAGAG AGAAATATGG GTATCGGTTT GGAATGTATC TGGCAATGAA
CATGAGCCGC TACTTAAACT GGATAGAGAA AATTTTTTGC TGTCTGATGC TAATGGAAAT
GAAGTGGAAT TCAAGTTTAA CGATCCGGAA GTTCGAGACC CTGATATTCC TGAACATGAA
TACTTGCTAA GCCCTACTGA AGGTGAATTT ACAGGAACTA ATAAATTAAC ATTTACCAAA
GCAGGCTATC AGTCCGGCAG CAAGTTATTC ACTATAGTTT CTGGAGATGA AGGTCCGTTT
ACGCCAGGTG AAGGAGGAAT ACTTCCCGCC TTTGACCCTT TCACACCCCA ACAAAATACC
ATTGGCTGTT TGTATTCAGT CAAAAGCCAG CGGGAAAACA GGTGGCTTGG CGGGACGGAA
CCCGTAGTGG AACTAAGATT CTCACCGGCG TCTCAGAATG ATGCCGAGAG CTATACTCTG
CAGTATTCTA CGAACGGCAC AAACTGGCAA AACTATCAAG TATATTCTGA GGATTTAAAA
AGCTCGGCAA CCCAGGACAA TTTCAGCCTT TCTAATCCCG GCGGGTCCTA TTACTACCGT
CTTTTGGTAA ATGGCGGGCC TAAAAATGGC TATACATCAA ACGCTGTAGC TGCACCGTTA
TCCAATATCA ACACATATTT CAGCGGGTGG TCCCTGGATG AAAGCGTGTA TATTAGCGGG
ACTATGGCGC CCTGGATCGG CAGGGGCCTG GAGGCAGCTT TTACTGTTAA AAGTCTCGAG
GAACAGTCAG TGGTGGACGA AGTATATTTA AGCTGCCAGT GGTACAGAGT AAATCCGGCT
ACTTACGAAA TGGAACTTAT CGACGGAGCG ACAAGCTTAA CCTATATTAC AAACGAATCG
GACGCAGGCT ATAAATTGCT TATCCAGGCA ACGGGAGATG GGATAAATAT AGGTGGTTTT
GAGCAGGTAA TGTCCGGTTT TAAAAATGTA TTGCCCAACA AAGCCTTTGC CTCAGATGTA
ACTGACAGCG GATTTACGCT CAATCTCTAT AAAAGCGTGG ACAATCTGAC AAGCGATGTT
TTAATTCTTC GGAATTCCAA TGATGATCTC GTTCCCATTA TTTCTGTAAC GCCGGTGGGA
AGCAGTAAAG CAAAATTCAC CATCAATGCA GATATTCCGG CAACCAATGG GCCGTACCGT
TTGGAAAACA AATCAGATTT CTGGCTGCTT ATGGAAGAGA AGGAGCAAGG ATACATGCAT
GAGGGGTTAA CCATTGAGTA A
 
Protein sequence
MHNNRLFIVV LIIYMLLIFT GYAVAAEFSD ISGHWAQGQI NKWAEKGLVS GYQDGTFKPN 
NQISRAEFVA MINRAFAIDK GNTTADFTDV KPGKWYYEEV ISAKTAGYIG GYVDGTFKPD
QTITRQEVAS ILVRLLKINP SIEGLAKFGD AGQIQEWARG SVGAAAKAGL MRGMPDNTFK
PIRSITRAEA VVSLHNALAY ASGEPKTVEE PKTVVGTTLE GTVTLDGSAL DKVVVRIFAA
DSHKVLKEVQ TDNQGYFKAE LKAGYYDITA TTDSAVAYKA DVNIVENKIA EINLNLEDAA
IVKGILKDNN GRAVKNATIL FTTNPTFITS TNINGEYTIA VMADRTYTVR AYEQIHNDKE
PSVVTSSQHV GSAGTQNIGT LKAPFTLAYT GGSSGGGSSS NTQIISINTI DNLSIINGST
GQKTITTSPT DVTIKAFSSS EQVAGVTVLS KTMTISANEA GNATITVTAE KSGYESTTRT
FTVNVIEKDK SIPLDNPVII PEDAKKLEFT NGVQLDFSVI TIPAENTLTV TELSDSDYEV
PSVQEGQVFK TAGKVVKIEL QGNVDLNKGV NLVLPFEGDP GADLAIFYFD NGEWKYMDSI
VDVSNKVIQT TVYHFSNWAP FKASQVAKPE ASTASGEIEK GTNVSLTTTS EGATIYYTTD
GTVPTIRSSK YTGPIGINSN LTIKAIAVKS NMRNSDEATF EYTVTEVPVT GIDVSLVKMD
LTVEKTLEID ATVIPENATN KNVAWTSSNE EVATVSSSGL VTGVGVGVAT ITATTKDGGF
AATCEVTVTA ASPQTPVELE IICSSEREIW VSVWNVSGNE HEPLLKLDRE NFLLSDANGN
EVEFKFNDPE VRDPDIPEHE YLLSPTEGEF TGTNKLTFTK AGYQSGSKLF TIVSGDEGPF
TPGEGGILPA FDPFTPQQNT IGCLYSVKSQ RENRWLGGTE PVVELRFSPA SQNDAESYTL
QYSTNGTNWQ NYQVYSEDLK SSATQDNFSL SNPGGSYYYR LLVNGGPKNG YTSNAVAAPL
SNINTYFSGW SLDESVYISG TMAPWIGRGL EAAFTVKSLE EQSVVDEVYL SCQWYRVNPA
TYEMELIDGA TSLTYITNES DAGYKLLIQA TGDGINIGGF EQVMSGFKNV LPNKAFASDV
TDSGFTLNLY KSVDNLTSDV LILRNSNDDL VPIISVTPVG SSKAKFTINA DIPATNGPYR
LENKSDFWLL MEEKEQGYMH EGLTIE