Gene Dtox_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0417 
Symbol 
ID8427352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp429695 
End bp430786 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content42% 
IMG OID645032801 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003189979 
Protein GI258513757 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.413645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0217582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAATTG TCTACCGGTT TGAAATGCGT CCGACCAAAG AGCAACAGAA AAAAATGTTT 
CACACACTAA AACTTTGCCG GAAACTCTAT AACTGGTCTT TATCTGAGCG TCAGCGTGTG
TATAAAGAAA CCGGCCAAGG GTTGACATAT AATAAACAGC AGAATATGCT GCCGGGCTAT
ACAAAAGAAC ATCTGGAATA CAAGCAAGTT CACAGTCAGG TAATGCAGGA TACTTTGCGC
CGGGTAGACT TTGCCTATCA GCGGTTTTTT GCCAAAGAAG CCGGATACCC CCGGTTCAAA
AACCGTGACC ATTACACATC ATTTACCTAT CCCCAGATGG ATGCTGTAAA GAAAACTTTC
TCTAAGCCGG GTAAAATCTA TCTTTCTAAA ATAGGTTTCG TAAAAATGAC AACTCACCGG
GAATTTGATG CCAGTCAAAT ATCCAGGGTT AACATAAAGT ATCACGGTGG TAAGTGGTAC
GCTAATTTGA CTGCCGAAGT GGAAGTACTC GAAAATCTTA TCGACAGTAC CAAATCCATT
GGAATAGACG TGGGCCTTGA ACATTTTGCT GTATTGTCTG ATAGTACAGA AATAGGAACC
CCAAAATACT ATCGTAAATC AGAAAGGAAG TTAGCCAAAC AACAGCGAAG ACTTTCTCGC
AAAAAGAAAG GTTCTAACAA CCGAGGGAAA GCTAAAACTA AAGTGGCTAG ACTTCATGCT
AAGATAACTA ATCAACGGAA AGACTTTCTA CACAAGGCCA GTCTAGACGT GGTTCAGAGC
CATGATATTG TCTTCATGGA AGATCTAAAG ATCAAGAACA TGGTCAAAAA CCACTACCTA
GCTAAAAGCA TACATGATGC TTCATGGGGT ACATTCAGAA ACTTTGTTGA GTATAAATGT
CACAGATATG GTAAAATATT TCTTCCTGTC CCTCCTCATG GCACTTCCCA GACATGTCTT
TGTGGTGCCA ATGTGCCAAA GGATTTGAGT GTCAGAGTGC ACCGGTGTCC TGCTTGTGGA
ATGGTTATGC CCAGGGATTT GGTGTCAGCC ATATTGATAG AACGTCGTGG CTTAGAAATG
CTAGCGGCTT AG
 
Protein sequence
MQIVYRFEMR PTKEQQKKMF HTLKLCRKLY NWSLSERQRV YKETGQGLTY NKQQNMLPGY 
TKEHLEYKQV HSQVMQDTLR RVDFAYQRFF AKEAGYPRFK NRDHYTSFTY PQMDAVKKTF
SKPGKIYLSK IGFVKMTTHR EFDASQISRV NIKYHGGKWY ANLTAEVEVL ENLIDSTKSI
GIDVGLEHFA VLSDSTEIGT PKYYRKSERK LAKQQRRLSR KKKGSNNRGK AKTKVARLHA
KITNQRKDFL HKASLDVVQS HDIVFMEDLK IKNMVKNHYL AKSIHDASWG TFRNFVEYKC
HRYGKIFLPV PPHGTSQTCL CGANVPKDLS VRVHRCPACG MVMPRDLVSA ILIERRGLEM
LAA