| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0350 |
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| Symbol | |
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| ID | 8427285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 363208 |
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| End bp | 364140 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645032748 |
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| Product | nickel ABC transporter, permease subunit NikB |
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| Protein accession | YP_003189926 |
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| Protein GI | 258513704 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAAGT ATATTTTCAG ACGATTACTC AACATAATAC CGGTGCTGCT GGGTATATCT
GTAATAACCT TCGGCTTAAT TCATATGGTA CCCTGTGATC CGGCAGAAGT CTACCTGAGG
CTGTCACAAA TTCCTCCCAC AGATGAAGCT GTTGCTCTGG TAAGATCCGA ATTAGGACTG
GACAGACCAT TATATATTCA GTATTTTGAC TGGCTGTGGA AAGTGTTTCA TCTTGATTTC
GGCAAATCCT TCGTGACAAG ACAACCTGTT TTGCCGTCCG TATTATATTA CATTCCAGCT
ACAATACAAC TAACCGCTTG TTCTTTACTC CTCATGTTCT TAATAAGTAT ACCCCTCGGC
ATTTGGGCTG CTTTATACAA GGACAGCTTG CTTGACCAGT TTAGCAGGAT ATTGGCATTT
ATAGGCGCAT CTATGCCAAG CTTCTGGCTG GGATTCCTGC TGCTGTATGT TTTTTCTTTA
AAGCTTGATT TGCTGCCGGT TACAGGAAGA GGAACTTTCT TGCATCTTAT TTTACCATCC
TTAACTCTGG CACTGGGATA TGCGGCTACA TATACCAGGC TCTTGAGGAC AAGTATGTTG
GAGAACTTAA ATAAAGATTT TGTATTGTAC GCCAGAGTCA GAGGAATTAA AGAGAAGCTC
ATTATCGGTA AGCATGTTTT TAAAAATGCA CTGCTGCCAA TGATAACTGC TTTCGGAATG
AGTCTGGGGC ATTTACTGGC AGGCTCTGTC ATAGTGGAAA ATATTTTTGC CTGGCCGGGT
GTTGGCAGGT ACTGTGTTTT TTCCATATTC AGCAGGGATT ACCCGGTTAT TCAGTGCTAT
GTTTGTTTAA TGGCTGTAAT ATTTGTTGTC TGCAATCTCC TGGTTGATAT TGCCTACGTA
TATTTAGATC CGCGCATCAA AATAGGAAGG TAA
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| Protein sequence | MKKYIFRRLL NIIPVLLGIS VITFGLIHMV PCDPAEVYLR LSQIPPTDEA VALVRSELGL
DRPLYIQYFD WLWKVFHLDF GKSFVTRQPV LPSVLYYIPA TIQLTACSLL LMFLISIPLG
IWAALYKDSL LDQFSRILAF IGASMPSFWL GFLLLYVFSL KLDLLPVTGR GTFLHLILPS
LTLALGYAAT YTRLLRTSML ENLNKDFVLY ARVRGIKEKL IIGKHVFKNA LLPMITAFGM
SLGHLLAGSV IVENIFAWPG VGRYCVFSIF SRDYPVIQCY VCLMAVIFVV CNLLVDIAYV
YLDPRIKIGR
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