Gene Dtox_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0348 
Symbol 
ID8427283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp361355 
End bp362350 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content42% 
IMG OID645032746 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003189924 
Protein GI258513702 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAC AGCCTGTTTT ATCTGTAGAA AATTTACATG CACATATACC TACTGCTGCA 
GGGACGATCA GAGCAGTAAA CGGTATCAGT TTCCGGATCT GGCCCGGTAA AGTGCTGGGC
TTGATGGGAG AAAGCGGTTG TGGAAAAAGC ATTACTTGTT TATCTGTTTT AGGCCTTTTA
AACGGTGCGG GGAAAATTAT CAAGGGAAAA ATAAGACTTA AGGATAGGGA TATTTTGAGT
TTGCCAACTG AGGAATTAAG AAAATTACGG GGAAACGAAA TCAGCATGAT TATGCAAAAT
CCAATGAGCA GCTTCGATCC CATAGTATCT ATTGGTCAGC AGTTTATTGA AACAATCAGA
AACCATAAAA AAGTAACAAA GAGGGAAGCC ATAACTACGG CGCTTGAATG TTTACGGCAG
GTAGAACTGC CTTGCCCCGA AGACTTATTC AACCGTTATC CTTTTCAAAT GAGCGGCGGA
ATGCTCCAGA GAGTAATGAT TGCCATAGCC ATTGCTTCAA ATCCAGCAGT CTTAATTGCC
GACGAACCTA CCACTGCTCT GGACGTCACA GTGCAGCAGC GGATACTGGG TCAATTGGTG
AAAGTTCAGG AGAAGTATAA TACGGGAATA TTGTTGGTTT CTCATGATTT GAAAGTGATT
GCCCAAATGG CAGATGAAGT AGCAGTTATG TACTGTGGAT ATATTGTTGA AAAAGGACCT
GCTATGAAAA TATTTGATCA TCCTCTGCAC CCTTACACCC GTGCACTGCT GGCTTCAAGG
CCGGGTTTGC AAAAAGCCAG GCTAAAACCC ATTAAGGGTC AACCGCCGGC CTTAATAGAT
TTAAAAGACA TATGCCCTTT TTTCGAAAGA TGCGATGAAG CAAATAAAGC TTGTTTGGAA
TATAAGGTAT ATTTAACACG GTATGCCCCG GATCATTTTG TAAGCTGCCT TAAATATGCT
TCAAATCAAG AGGTAGTGCT ATATGAGCTT GCTTGA
 
Protein sequence
MTLQPVLSVE NLHAHIPTAA GTIRAVNGIS FRIWPGKVLG LMGESGCGKS ITCLSVLGLL 
NGAGKIIKGK IRLKDRDILS LPTEELRKLR GNEISMIMQN PMSSFDPIVS IGQQFIETIR
NHKKVTKREA ITTALECLRQ VELPCPEDLF NRYPFQMSGG MLQRVMIAIA IASNPAVLIA
DEPTTALDVT VQQRILGQLV KVQEKYNTGI LLVSHDLKVI AQMADEVAVM YCGYIVEKGP
AMKIFDHPLH PYTRALLASR PGLQKARLKP IKGQPPALID LKDICPFFER CDEANKACLE
YKVYLTRYAP DHFVSCLKYA SNQEVVLYEL A