Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0326 |
Symbol | |
ID | 8427261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 336604 |
End bp | 337260 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645032724 |
Product | Rhomboid family protein |
Protein accession | YP_003189902 |
Protein GI | 258513680 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCCT TAAAAGATGA TATCCCTTCA AGCCGGTTTC CTCTGGTTAA TATATCTTTA ATCATAGTTA ATTTAGTTAT ATTTGTATAT TTGGTTTTAA ATAATAATTT GGATGTTTAT ATTATGACAC ATGGTGTGGT ACCGAAAGAT TTTTTTAGTG ATTTTTCCCC TTTTACACAG TTTTATTTGT TTACCATTGC TATATTCCTT CACGGCGGAT GGTTGCACGT GCTGGGAAAT ATGCTGTATT TATGGATATT CGGTGATAAT GTCGAGGATC GTATGGGGCA TTTTCGCTAT CTGATTTTTT ATATGATTTG CGGTTATACA GCTACACTGG CGCATGTGTT GGCAGATCCG CTTTCTACTA TGCCTATGGT TGGTGCCAGC GGTGCCATTG CGGGTGTATT GGGAGCATAT TTGGTATTGT TTCCGCGGGC CAGAGTTTTA ACATTGCTGC CGATTTTTTT CTTTATAACC TTTATTCGTA TTCCGGCCGT ATTGTTTCTG GCCTTTTGGT TTATTCTACA AATATTCAAT GGTATGGTTA GTGGTTCTGC CGGAGTGGCC TGGTGGGCCC ATATCGGAGG ATTTATTGTA GGCATGCTTT TAGTGAAATT CATGGAAAAA AAGAAGAACA AATATTTTTT CTCTTAG
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Protein sequence | MIPLKDDIPS SRFPLVNISL IIVNLVIFVY LVLNNNLDVY IMTHGVVPKD FFSDFSPFTQ FYLFTIAIFL HGGWLHVLGN MLYLWIFGDN VEDRMGHFRY LIFYMICGYT ATLAHVLADP LSTMPMVGAS GAIAGVLGAY LVLFPRARVL TLLPIFFFIT FIRIPAVLFL AFWFILQIFN GMVSGSAGVA WWAHIGGFIV GMLLVKFMEK KKNKYFFS
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