| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0313 |
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| Symbol | rpsD |
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| ID | 8427248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 325679 |
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| End bp | 326305 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645032711 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_003189889 |
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| Protein GI | 258513667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.977941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.670617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATACAGGCCC TCAATGTAAA CTTTGTCGCC GTGAAGGCTT GAAGTTATAT
TTAAAAGGTG ACCGTTGTTA CTCTGACAAG TGCGCCATTG ATCGGAGAAG TTATCCTCCC
GGCCAACACG GGCAATCCAG ACGAAAAGTG TCTGAGTACG GTACACAGCT CAGAGAAAAA
CAAAAAGTGC GCCGTATCTA CGGTGTGCTG GAGAAGCAAT TCCGTACCTA TTTTGACAGA
GCCGATCGCC AGCAGGGTAT TACCGGTGAA AACCTGCTCC GGCTTTTAGA AAGACGTATG
GACAATGTAA TATTCCGTAT GGGTTTAGGT GCATCAAGAG TGGAAGCAAG ACAGCTGGTA
ACTCACGGTC ACTTTACTGT TAACGGCAGA AAAGTTGATA TACCGTCATT CCTGGTAAAA
GTCGGCGATG TAATCGGCAT TCGGGAAGGC AGCAAAGATT CTCCCAGGAT AAAGGAATTA
ATGGAACGGG CAGCAGAAAA GACACGTCCG GCATGGCTGG AATATGACAG TGACGCGGCT
CAGGGCAGGA TTGTAGCATT GCCGAGGCGG GATGAAATTG ACGCACCGGT TCAGGAACAC
CTGATTGTAG AACTCTACTC CAGGTAA
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| Protein sequence | MARYTGPQCK LCRREGLKLY LKGDRCYSDK CAIDRRSYPP GQHGQSRRKV SEYGTQLREK
QKVRRIYGVL EKQFRTYFDR ADRQQGITGE NLLRLLERRM DNVIFRMGLG ASRVEARQLV
THGHFTVNGR KVDIPSFLVK VGDVIGIREG SKDSPRIKEL MERAAEKTRP AWLEYDSDAA
QGRIVALPRR DEIDAPVQEH LIVELYSR
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