Gene Dtox_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0267 
Symbol 
ID8427197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp292124 
End bp292864 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID645032660 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_003189843 
Protein GI258513621 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000223613 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.011395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACT TGAGTGACGT GATAGTGGGT CGTAACCCTG TTAAGGAAGC TTTAAAATCA 
CAGCGACCCA TTAACAAGGT GCTGGTGGCT AAAGGTAAAT TATCCGGTTC ACTTGCGGAA
ATATGCAGCT TAGCCAGGCA GAACGGTATT CCTGTACAAG AGGTAGACAG GACTGCTTTG
GAAAAGATAT CTGCGGAAGC TGTACATCAG GGTGTAGCTG CTTACGCAGC AGCCAAAGAG
TATGTGGAGT TAGAGGATAT CCTCGCCCGT GCAGGTGAGC AGGAGCCATT TATTATTATG
CTGGACGAAA TTACGGACCC GCATAATTTG GGAGCCATAA TCCGTACTGC TGATGCCGCA
GGCGTTCACG GCGTGGTAGT AACCCGTCGA CGTTCTGCGT TGCTAACACC GGTGGTAGCT
AAGTCTTCGG CAGGTGCGGT GGAATATGTG CCTGTGGCCA GAGTAACTAA CCTTGTGCAG
TCAATAAAAA TCTTGCAGGA GAATGGCATA TGGGTTGCCG GGGCTGATAT GGAAGGTGAC
AAGGTGTATT GGGAAGCGCC CTTGAGCGGG CCTATTGCTA TAGTAATTGG GGGCGAAGGA
AAAGGTCTGG GGCGCCTGGT AAAAGAAAAG TGTGATTTTC TGGTGAGATT GCCTATGCAG
GGGAAAATAA GTTCCTTGAA CGCATCGGTT GCAACTGCTC TATTAGCCTA TGAGGTGGTT
CGCCAGAGGA GTTCCGGGTG A
 
Protein sequence
MKNLSDVIVG RNPVKEALKS QRPINKVLVA KGKLSGSLAE ICSLARQNGI PVQEVDRTAL 
EKISAEAVHQ GVAAYAAAKE YVELEDILAR AGEQEPFIIM LDEITDPHNL GAIIRTADAA
GVHGVVVTRR RSALLTPVVA KSSAGAVEYV PVARVTNLVQ SIKILQENGI WVAGADMEGD
KVYWEAPLSG PIAIVIGGEG KGLGRLVKEK CDFLVRLPMQ GKISSLNASV ATALLAYEVV
RQRSSG