| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0261 |
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| Symbol | ispD |
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| ID | 8427191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 286506 |
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| End bp | 287204 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645032654 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003189837 |
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| Protein GI | 258513615 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000221338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00613282 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGTCTAA TTAGCACGAT TATAACAGCC GCGGGACAGG GTTTACGCAT GGGGACTGAT
ACAAGAAAGC AGTACCTCAG CTTGCAAGGT AAACCTATTC TTTCTTACGC AATTGAGACC
TTTATTGGAA TGCCGGCGGT TAACAATATT ATTTTAGTGG TTAGTCCCGG AGACGAGTCT
TTTTGTCTGG AGAATATTAT TCCCATACAC GGAAGATCTA AAGTACAGGC CGTAGTTGCC
GGCGGTGCGA GCAGGCAGGA ATCCGTATAT AACGGGTTGC TTGCATTACC GCAAGGGACA
AACCTGGTAA TAATACATGA TGGCGTTCGC CCGTTGTTCG AGGGCAACGA AATTGATGCC
TTGCTGGAGG CAGCGGCTGT AAATGGTGCG GCCACTCTGG CCGTGCCGCC AAAGGATACT
GTAAAGCTGG TAAATGAGTA TAATAAAGTA GTGCGGACTT TACCCCGTGA GAGATTATGG
TTAACTCAGA CACCACAGGT TTTTAAATAT GATATAATTA TGAATGCACA CCAAAAGGCG
CGCCGGCACG GCTTTGAGGC TACTGATGAT GCTTCGCTGG TGGAAGTCAG CGGACAACAG
GTAAGGGTTA TTGAAGGATC TTATGAGAAT ATTAAAATCA CAACCCCGGA GGATATGATA
ATAGCCGAGG CTATTTTAAA CAGGAGAAAG CATAAATGA
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| Protein sequence | MSLISTIITA AGQGLRMGTD TRKQYLSLQG KPILSYAIET FIGMPAVNNI ILVVSPGDES
FCLENIIPIH GRSKVQAVVA GGASRQESVY NGLLALPQGT NLVIIHDGVR PLFEGNEIDA
LLEAAAVNGA ATLAVPPKDT VKLVNEYNKV VRTLPRERLW LTQTPQVFKY DIIMNAHQKA
RRHGFEATDD ASLVEVSGQQ VRVIEGSYEN IKITTPEDMI IAEAILNRRK HK
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