Gene Dtox_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0216 
Symbol 
ID8427140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp235737 
End bp236297 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content41% 
IMG OID645032603 
Producttranscriptional regulator, AbrB family 
Protein accessionYP_003189792 
Protein GI258513570 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.643498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA CAGGAATAGT CCGGCGTATT GACGACTTAG GCCGAGTTGT GATACCGAAG 
GAAATCAGGA GAACGTTGAG AATACGTGAA GGTGATCCCC TGGAAATATT TGTAGACAGG
GAAGGGGAAG TCATTTTAAA AAAATATTCC CCTATTGGAG AGTTGGGTGA TTTCGCTAAA
GAATATGCGG ATTCTTTGTA CGAGGCTTTA GGACATATAA CTTGTATCGC TGACCGAGAT
GCCATAATAG CAGTATCAGG TGCTCCGAAA AAAGAATTTT TAAATAAGCC TATCGGGCCT
TTTGTCGAAA AGGTGATGGA AGAACGTAAA GCTGTTATTA TAAATGGTTC AGCAGAAGAT
GTTTATTGCA AGGAATGTAT TATTATGGAT GAAGATGAAT GCAGGTATTC TTGTGAAGTT
ATAGCTCCAA TAATTGCTGA AGGGGATCCA ATAGGTGCGG TTATACTTGC TTCCAGGGAG
ACGGATATCA AAATGGGAGA AATGGAGTTA AAGCTGGCTG AAACTGCCGC CGGTTTCCTG
GCTAAACAAA TGGAGCAATA A
 
Protein sequence
MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR EGEVILKKYS PIGELGDFAK 
EYADSLYEAL GHITCIADRD AIIAVSGAPK KEFLNKPIGP FVEKVMEERK AVIINGSAED
VYCKECIIMD EDECRYSCEV IAPIIAEGDP IGAVILASRE TDIKMGEMEL KLAETAAGFL
AKQMEQ