Gene Dtox_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0202 
Symbol 
ID8427126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp220762 
End bp221463 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content46% 
IMG OID645032589 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003189778 
Protein GI258513556 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0023081 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTATC CTAAATTAAA GGAAGAACCT AAATTAATTC CAATTAAACT GGATAATTAT 
AAACCATTGC GGGAAGTGGT TTTTGAATCT TTACGGGAAG CTATTATAAA TGGGAGATTA
TCTCCGGGCG AACGTTTGAT GGAGATTCAA CTGGCCGAGG AGATGGGTGT GAGCCGGACT
CCTGTGCGTG AGGCCATTAG AAAATTAGAG CTGGAAGGTT TCGTGGTTAT GATTCCCCGA
AAAGGTGCTT ATGTAGCTGG AATCTCCATA AAGGATATCG CTAATGTTTT TGAAGTAAGA
GCGGCTCTGG AGGCGTTGGC AGCCGGTCTG GCTGCGGAAA GAATAACGGA AGAGGAACTG
GATGAGCTGG AACGCTACCT TGTAGAAATA TCAGAGTTGC GTGAAAGCGG GAATTTGGAT
GCTATAGTCG AGAAAGACAC TATGTTCCAT GATGTTATTT ACAGGGCCAG CCGCAATGAA
AGGTTGGTGC AGATAGTCAC TCACCTGCAG GAGCAAATTC ATCGTTTTCG TACCGCTTCA
TTAGCAAGGC CCGGCAGGAC CAGAGATGCA CTGGATGAGC ACAAGAAGCT TGTGGAGGCT
ATATCGGATA GGGATGTGGA ATTGGCTCAG AAGCTGGCCA GGGAGCATAT TGAAAATGCT
GAGAACAGTA TGATCAGTGC TGTACAGGAG GCCGGTGTCT AA
 
Protein sequence
MDYPKLKEEP KLIPIKLDNY KPLREVVFES LREAIINGRL SPGERLMEIQ LAEEMGVSRT 
PVREAIRKLE LEGFVVMIPR KGAYVAGISI KDIANVFEVR AALEALAAGL AAERITEEEL
DELERYLVEI SELRESGNLD AIVEKDTMFH DVIYRASRNE RLVQIVTHLQ EQIHRFRTAS
LARPGRTRDA LDEHKKLVEA ISDRDVELAQ KLAREHIENA ENSMISAVQE AGV