| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0173 |
|---|
| Symbol | |
|---|
| ID | 8427097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 195664 |
|---|
| End bp | 197457 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 645032562 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003189751 |
|---|
| Protein GI | 258513529 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGT ATAGGTCACA TGTACTTGTC TGTGCCGGGG CAGGCTGTAT ATCCTCGGAC
TGCAAAGCAG TGCAAAGCGC GTTAATAGCC AATATTCAAG CACAAGGATT GAAAGATGAA
ATAAAAGTCG TGGAAACCGG CTGCATGGGA CCCTGTGACC TGGGTCCGGT GGTGCTGATT
TTTCCTGACG GGGTTTTTTA CCGCAAGCTG AAACCGGAAG ATACAGCTGA TATCGTTACC
GAACACCTGC TCAAGGGCAA ATTAGTTGAC CGTCTTTTGC ACCGGCCTAC CGGAAAATCA
GAACAGGTCG CAACATTCGA CCGGATGGAA TTCTTCAAGC GTCAAACCAG AGTCACCCTG
CGCAACACCG GACTGATTAA TCCTGAATCC ATAGAAGAAT ACATTGCCAG GGACGGCTAC
CAGGCCTTAG GCAAAGTGTT ATCAAAATAC TCACCGGAGG AGGTTATTTC GGCTATTAAA
GCTTCCGGTC TGAGGGGCAG GGGAGGGGCC GGCTTTCCTA CAGGCTTGAA ATGGGAATTT
ACTGCCCGGG CCTCCGGAAA TCCCAAGTAT GTGGTATGCA ACGCCGATGA AGGTGATCCC
GGCGCGTTTA TGGATCGCAG TATTCTGGAA GGGGACCCGC ACAGTGTATT GGAGGCCATG
GCTATCTGCG GCTACGCTAT CGGAGCGGAA AAAGGCTTTA TTTATGTGCG CGCGGAATAC
CCGCTGGCAG TGCAGAGGCT GGAAACAGCC ATCGGCAAAT GCCTGGAATA CGGTTTGCTG
GGCCGAAATA TTTTCAGTAC CGGTTTTAAT TTTGATATAG AAATAAGAGT AGGAGCAGGC
GCCTTTGTCT GTGGTGAAGA AACAGCCCTG CTGGCTTCTA TTGAAGGCCG GCGCGGCGAA
CCCAGACCAA AGCCGCCTTT CCCTGCACAG GAGGGACTCT GGGGCAAACC CACTGTAATT
AATAACGTTG AAACCTGGGC CAACATACCC CCAATTATTC TCAACGGACC TGAGTGGTTC
AGCGCTATTG GGACAGAGAA CAGCAAAGGC ACTAAGGTTT TTGCCCTGGC CGGCAAAATC
AACAATACCG GACTGGTTGA AGTGCCTATG GGTACTCCTT TAAAGGAAAT CATCTATGAT
ATCGGGGGCG GCATACCTAA CGGCAAAAAA TTCAAAGCCG TACAAACCGG CGGACCCTCC
GGCGGCTGTA TCCCGGCAGA ATATCTGGAC ACTCCGGTAG ATTATGATTC CCTGGTTAAA
CTGGGCACAA TTATGGGTTC CGGCGGCATG ATTATTGTAG ATGAAGACAC CTGCATGGTG
GATTTAGCCA AGTTTTTCCT CGAGTTTGTT CAGGAAGAAT CCTGCGGCAA ATGCGCTCCC
TGCCGTATAG GAACAAAACG CATGCTGGAA ATAATGGAGC GAATCGTCGA AGGCAACGGT
AAAGACGGTG ATATAGAATT GCTGGAAGAG CTCAGCCAGG GCATTAAAAG CTCCGCCTTA
TGCGGACTGG GACAAACAGC GCCCAACCCT GTTTTAAGCA CGCTCAGGCA TTTTCGGGAA
GAATATATAG CCCATATAAA AGACAAAAGA TGTCCGGCCG GAGCCTGCCA AGCACTGGTT
ACCTACTATA TCGATGCAAG GGCCTGTAAA GGCTGCGGTT TGTGCAGCAA AAATTGCCCT
GCCGGCGCTA TCAGCGGGGA AAAGAAAAAA CCGCATGTTA TTGATGCGGG CAAATGCATC
AAGTGCGGGA CATGCAAAGA CAAGTGCAAG TTCAATTCAA TATTTATTTT ATGA
|
|---|
| Protein sequence | MSMYRSHVLV CAGAGCISSD CKAVQSALIA NIQAQGLKDE IKVVETGCMG PCDLGPVVLI
FPDGVFYRKL KPEDTADIVT EHLLKGKLVD RLLHRPTGKS EQVATFDRME FFKRQTRVTL
RNTGLINPES IEEYIARDGY QALGKVLSKY SPEEVISAIK ASGLRGRGGA GFPTGLKWEF
TARASGNPKY VVCNADEGDP GAFMDRSILE GDPHSVLEAM AICGYAIGAE KGFIYVRAEY
PLAVQRLETA IGKCLEYGLL GRNIFSTGFN FDIEIRVGAG AFVCGEETAL LASIEGRRGE
PRPKPPFPAQ EGLWGKPTVI NNVETWANIP PIILNGPEWF SAIGTENSKG TKVFALAGKI
NNTGLVEVPM GTPLKEIIYD IGGGIPNGKK FKAVQTGGPS GGCIPAEYLD TPVDYDSLVK
LGTIMGSGGM IIVDEDTCMV DLAKFFLEFV QEESCGKCAP CRIGTKRMLE IMERIVEGNG
KDGDIELLEE LSQGIKSSAL CGLGQTAPNP VLSTLRHFRE EYIAHIKDKR CPAGACQALV
TYYIDARACK GCGLCSKNCP AGAISGEKKK PHVIDAGKCI KCGTCKDKCK FNSIFIL
|
|---|
| |