Gene Dtox_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0106 
Symbol 
ID8427029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp114182 
End bp115783 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content46% 
IMG OID645032502 
Productmethionyl-tRNA synthetase 
Protein accessionYP_003189692 
Protein GI258513470 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000102629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000228434 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCAAAC CTACATTTTA TATTAGCACG CCAATTTATT ATCCCAGCGA TAAACTTCAT 
ATAGGTCACG CTTATACTAC CGTAGCGGCG GATTCCTTTG CCCGCTATAA ACGGATGAAG
GGTTATGATG TTTGGTTTTT AACCGGTTCA GATGAACACG GTCAGAAGAT TGAGAGGACA
GCTAAAGAAA AAGGCCAGTC ACCCCTGGAA TATGTGGATC AAATTGTGGC CGGATTTAAA
AGCTTATGGA AAAAGCTGGA CGTTAGCTAC GATGATTTTA TCCGCACTAC TCAGGAAAGG
CATAAAAAAG TAGTACAGGA TATTTTTCAG AAGCTCTATG ATCAGGGTGA TATTTATAAG
GCACAGTATG AAGGACATTA TTGCACTCCC TGCGAGACCT TTTGGACTGA GTACCAGCTT
GACGCAGACG GCAATTGTCC TGATTGCGGC AGGCCGGTAG AGATCCTCCA GGAAGAAAGC
TATTTCTTTA AGATGTCTAA ATATGCCGAC GAGATATTAA AATATATTGA GGATAATGCG
GAGTTTATTC AGCCCAACAG CCGCCGCAAT GAAATGGTTA GTTTTATCAA GAGCGGTCTG
GCGGATCTTT GCGTATCCAG AACAACTTTT GACTGGGGTA TACAGGTTCC TTTTGATCCC
AAGCATGTGA TTTATGTCTG GGTGGATGCT TTGACCAATT ACATTTCGGC ACTGGGCTAT
GGTACCGGGG ACGACAGCTT ATTTAGAAAG TATTGGCCGG CTGATATGCA CCTGGTGGGT
AAAGATATCG TAAGATTTCA CACTATTATT TGGCCAATAA TGCTAATGGC TGCAGGTATA
GAACTGCCCA AGCAGGTTTT AGGTCATGGC TGGCTTTTGC TGGACAGCGG CAAGATGTCC
AAGTCAAAAG GAAACGTTGT TGATCCGCTG GAGCTTTGTG ATAAGTACGG GGTAGATGCC
ATTCGCTATT ACCTTTTAAG GGAATTGCCT CTGGGTTCTG ACGGTTATTA TTCAGAGGAG
GCTCTGGTAA ACAGGATTAA TATCGATTTA GCCAATGATC TGGGCAACCT GATCAGCCGC
TCCACCTCTA TGATAGTTAA GTTCAGCAAA GGTGTGCTGG AGGAACCCGA AACACCCAGG
GAGCCGGTAT TACTGGAACA ATACCTTGGT TCAGAGGAAG CTCCGGCTGA AGACAGGGAT
TTAATCAGTC TGGCTTTAAA GACAAAATAC GAAGTAGATG ATCTTATGGA GCGCCGGGAT
ATATCGGGTG CCTTGGCTGC CGTTTGGCGG TTGGTGGGGC GGGCCAACAA GTATGTTGAG
GAGACATCTC CCTGGAGCCT GGCTAAGGAC CCGGAACTGA GAGGAAGGCT GGCTACAGTG
TTGTATAACC TGGCGGAAAC TATCCGTTTT GTTACTGTTA TGGTTACTCC TTTTATGCCT
AATTTCCCTT CTATGGTTTG GCAGCAGTTG GCCATAGGAA ACCAACCGGA ATTGCATGTT
TGGGAAGCTC TGGAGTGGGG CAATTTACCC GCTGGAACGC GGGTAGTTAA AGGTGATGCT
ATCTTTCCCC GGATTGATCT AAAAACCTTG GAAAAAGAAT AG
 
Protein sequence
MSKPTFYIST PIYYPSDKLH IGHAYTTVAA DSFARYKRMK GYDVWFLTGS DEHGQKIERT 
AKEKGQSPLE YVDQIVAGFK SLWKKLDVSY DDFIRTTQER HKKVVQDIFQ KLYDQGDIYK
AQYEGHYCTP CETFWTEYQL DADGNCPDCG RPVEILQEES YFFKMSKYAD EILKYIEDNA
EFIQPNSRRN EMVSFIKSGL ADLCVSRTTF DWGIQVPFDP KHVIYVWVDA LTNYISALGY
GTGDDSLFRK YWPADMHLVG KDIVRFHTII WPIMLMAAGI ELPKQVLGHG WLLLDSGKMS
KSKGNVVDPL ELCDKYGVDA IRYYLLRELP LGSDGYYSEE ALVNRINIDL ANDLGNLISR
STSMIVKFSK GVLEEPETPR EPVLLEQYLG SEEAPAEDRD LISLALKTKY EVDDLMERRD
ISGALAAVWR LVGRANKYVE ETSPWSLAKD PELRGRLATV LYNLAETIRF VTVMVTPFMP
NFPSMVWQQL AIGNQPELHV WEALEWGNLP AGTRVVKGDA IFPRIDLKTL EKE