Gene Dtox_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0100 
Symbol 
ID8427023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp109028 
End bp109729 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content43% 
IMG OID645032496 
Productthymidylate kinase 
Protein accessionYP_003189686 
Protein GI258513464 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000072842 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGGGG TTTTTATTGT TTTTGAAGGG ATAGACGGTT CCGGTAAAAC AACACAGATT 
AATATTTTAT ATAAAAATTT GCTTCAGCAT AATAGAATTA AAAACCAACC GGCAGGTTCT
GAATATGTAC TATTGACCAG GGAACCCGGA GGCACTGCTA CCAGTGAGTT AATCAGGAAC
ATATTGTTGA ATCCTGCCAA TGACAAGCTG TGTGCCAGAA CTGAAGCACT TTTGTATGCT
GCGGCCAGAG CACAGCATGT GGAGGAAAGG ATTAGGCCCG CTTTATCCAG TGGCAAAATA
GTTATATGTG ACCGTTTTAT TGACTCTTCA CTGGCTTACC AGGGGTACGG GCGGGGACAG
GACCTGAGCT TTTTGCATAA TCTTAATCAA CTGGCTGCAG GTGGGTTAAA GCCGGATTTA
ACGATATTAT TGGATCTGCC AGTGGGCGCA GCTTTAAAAC GCTTGAACAA CCGCCAGGTT
AGCGGTATAG AAAAGGATCG CTTGGAGAGT GAAGCTGTTT CTTTTTACGA AAGAGTGAGA
GAAGGCTATT TAAAAATTGC AGGTACCGGT ATAGATAATA ACAGTGCCGG AAGCGGCGGT
TATCTTGTTG TAAATGCAGA TCAAGAGTTA AATAAAGTAA GTGACCGGAT TATAGACGGT
GTGGGTAACT GCCTTCCAAA GCTAGCGGTA CAGTTTAGAT AA
 
Protein sequence
MRGVFIVFEG IDGSGKTTQI NILYKNLLQH NRIKNQPAGS EYVLLTREPG GTATSELIRN 
ILLNPANDKL CARTEALLYA AARAQHVEER IRPALSSGKI VICDRFIDSS LAYQGYGRGQ
DLSFLHNLNQ LAAGGLKPDL TILLDLPVGA ALKRLNNRQV SGIEKDRLES EAVSFYERVR
EGYLKIAGTG IDNNSAGSGG YLVVNADQEL NKVSDRIIDG VGNCLPKLAV QFR