Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0059 |
Symbol | rho |
ID | 8426981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 64192 |
End bp | 65502 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645032454 |
Product | transcription termination factor Rho |
Protein accession | YP_003189645 |
Protein GI | 258513423 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.121136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0035916 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACCAGT CTGATTTAGA AGCTAAAACA ATGGTTGAGC TGTATAAAAT AGCCAAGGAA TTGGAAATAG TCGGTTACTC AAAGCTTCGC AAGAAAGAAT TAATATTTGA AATTATTAAA ATTAAGACGG AAAAAACCGG ATTGTTGTTT GCTTCCGGCG TGTTGGAAAT TTTACCTGAC GGTTATGGTT TTTTAAGACC GTTTAAATAT CATCCAAGTT ATGATGATAT CTATGTATCC GCCTCTCAGA TCAGGCGTTT TGATCTGCGA ACGGGTGACC GCGTAGGCGG CCAGGTAAGA AAGCCTAAAG ATAATGAAAG GTATTTTGCG TTATTGAGGG TAGAACAGGT TAACGGGATT GATCCCCAGG TTGCTGCTGA AAGAATTCAT TTTGACGGTT TAACCCCCCT ATATCCCCAA GAACGAATTA CTCTGGAAAC TTCTTCGGAA CGAAAATCTA CACGAATAAT TGATCTAATA GCTCCCTTGG GTAAAGGTCA ACGCGGCCTG ATTGTAGCTC CTCCTAAAGC AGGTAAAACT ATTCTGCTGA AAAGTATAGC TAATAGCATA ACCACCAACC ATCCCGAGAT CGTTCTCATA ATCTTGCTTA TTGATGAACG ACCGGAGGAA GTTACGGATA TAGAAAGATC TGTTAATGCG GAAGTCGTCA GCTCTACTTT TGATGAGCCT CCGGAAAATC ATGTAAAAGT GGCTGATATG GTTTTAGAGC GGGCTAAACG CTTGGTTGAG CATAAAAAAG ATGTGGTAAT TTTGATGGAC AGTATTACTC GCCTGGCCCG TGCTCATAAC TTGATTGTGC CTCCTAGCGG CAGAACCCTT TCAGGGGGTG TTGATCCGGC AGCTTTGCAT AAACCTAAAA GGTTTTTTGG TGCAGCAAGA AAGCTGGAGG AGGGTGGCAG CCTGACTATT CTGGCTACTG CATTGGTGGA AACAGGAAGT AGAATGGACG ATGTTATCTT TGAAGAGTTT AAAGGAACCG GCAATATGGA GCTGGTATTA GATCGCCGAT TGGCTGAGAA GAGAATTTTC CCTGCCATAG ATGTTCAACG TTCCGGAACC AGAAAAGAAG AACTTTTGTT GACAAAAGAT GAACTAGAGT TAACGTGGTT CTTCCGCAAG AATATTCACG GGTTGAATCC CTGGGACGCG ATGGAAATGA TGATGGAAAA AATAAGAGGC ACCCAGAACA ATGCGGAGTT GTTGCAAAAC TTCAAGCAGT CCAGGAAAGC CACCCCCGGC CGATTAAATA ACCCCGAAAT CCCCACCAAT AATACCAGAA AGATATTATA A
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Protein sequence | MNQSDLEAKT MVELYKIAKE LEIVGYSKLR KKELIFEIIK IKTEKTGLLF ASGVLEILPD GYGFLRPFKY HPSYDDIYVS ASQIRRFDLR TGDRVGGQVR KPKDNERYFA LLRVEQVNGI DPQVAAERIH FDGLTPLYPQ ERITLETSSE RKSTRIIDLI APLGKGQRGL IVAPPKAGKT ILLKSIANSI TTNHPEIVLI ILLIDERPEE VTDIERSVNA EVVSSTFDEP PENHVKVADM VLERAKRLVE HKKDVVILMD SITRLARAHN LIVPPSGRTL SGGVDPAALH KPKRFFGAAR KLEEGGSLTI LATALVETGS RMDDVIFEEF KGTGNMELVL DRRLAEKRIF PAIDVQRSGT RKEELLLTKD ELELTWFFRK NIHGLNPWDA MEMMMEKIRG TQNNAELLQN FKQSRKATPG RLNNPEIPTN NTRKIL
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