Gene Dtox_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0041 
Symbol 
ID8426963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp41935 
End bp43143 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content46% 
IMG OID645032437 
Productaminotransferase class I and II 
Protein accessionYP_003189628 
Protein GI258513406 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.782752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.197817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAG TTGTTAAAAT GGAGGAGCGG AAAGGTAGTC CAGACTGGTC GGAATTTATA 
AATCCGGTTT TAAAATCTTT GCCTCCGTCC GGTATACGCC GTTTTTTTGA TTTAGTTTCG
GAAATGAAAG ATGTTGTGTC TCTGGGGGTG GGTGAACCTG ACTTTGTTAC TCCACGAAAT
ATTATTGATG CTTGCGTCAG ATCACTTGAC AACGGTCAGA CCGGGTACAC CTCAAATCAA
GGTATGCTCG AGCTCAGAGA AGCTATTGCT GAAGAAATTA ACGGTTCCTA TGGTGTAAAG
TATGATCCCG TGTCGGAAAT CCTTATTACG GTAGGTGTCA GTGAGGCCTT GGATTTGGCT
ATGCGGGCCT TGATTTCACC GGGGGATGAA GTGCTTATTC CGGAACCGAC ATATGTTTCC
TATATACCTT GCGCTGCTTT AGCCTATGCC AAGACAGTGC CCTTAAAGAC CAATATGGAT
AAATTATTCA GAGTAACCGC TGAGCAAGTT GAGAAGGCTA TTACGCCGCG TACAAAAATA
CTGTTGCTGG CTTATCCGAA TAACCCAACC GGAGCTGTGA TGACCAGACA GGAATTGTTG
GATATTTGCG AAGTTGTTAA AGCGCATAAC CTGATTGTTA TTTCAGATGA GATATACGAA
CACCTGACCT ATATTGAACC TCATACCTGT GTATCCAGCC TGCCGGGCAT GAAGGAGCGC
ACTATCTTGC TGAGCGGCTT TTCCAAGTCT TATGCTATGA CCGGCTGGCG GGCCGGTTAT
GCTTGCGGCA ATCCGGACTT CATCGGTGCC ATGACCAAAA TTCACCAGTA TTCTATGTTG
TGTGCCCCGA CACAGGCTCA AGTTTGTGCT TTGGAAGCGC TCAGGAGCGG TAAGCCTGAT
ATGAGGAGAA TGACTGCAGA GTATAATAAG CGGAGAAAAC TTGTGGTGGA TGCCATGGAG
GAAATAGGTT TGCCATGTTT TGAGCCGGGC GGCGCGTTTT ATGCCTTCCC CGATATCACT
AAAACGAGAA TGAATGCCGC CGAATTTTCT GAGCGCTTGC TGATGGAGGA GAAAGTGGCA
GTTGTTGACG GTACTGCTTT TGGTGAAGCA GGTGAAGGCC ATGTAAGGAT TTCCTATGCT
TATTCCGTGG AGAAATTGAC GGAAGCTTTT AGGCGAATGA ATCGTTTTGT AAAGAGATAT
TCCAGTTAA
 
Protein sequence
MSEVVKMEER KGSPDWSEFI NPVLKSLPPS GIRRFFDLVS EMKDVVSLGV GEPDFVTPRN 
IIDACVRSLD NGQTGYTSNQ GMLELREAIA EEINGSYGVK YDPVSEILIT VGVSEALDLA
MRALISPGDE VLIPEPTYVS YIPCAALAYA KTVPLKTNMD KLFRVTAEQV EKAITPRTKI
LLLAYPNNPT GAVMTRQELL DICEVVKAHN LIVISDEIYE HLTYIEPHTC VSSLPGMKER
TILLSGFSKS YAMTGWRAGY ACGNPDFIGA MTKIHQYSML CAPTQAQVCA LEALRSGKPD
MRRMTAEYNK RRKLVVDAME EIGLPCFEPG GAFYAFPDIT KTRMNAAEFS ERLLMEEKVA
VVDGTAFGEA GEGHVRISYA YSVEKLTEAF RRMNRFVKRY SS