Gene Dtox_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0004 
Symbol 
ID8426923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2952 
End bp4082 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content29% 
IMG OID645032398 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003189592 
Protein GI258513370 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAATAA AAGAATTATT TATTAATAAT TTTCGCAACT ACAAAAGTTT GCATATAAAG 
CCCAAGGAAA ACTTAAATAT TTTTATAGGT GATAATGCCC AGGGTAAAAC TAATATACTG
GAAGCTATAT GTTTTTTATT GCAAGGAAGA TCTTTTCGAA CTTCACATGA AAAAGAAATT
ATAAATTTTG ATTCTGAGCA ATCTAAATTA AAAACTGAGT TGAAAGCTTA TAACCAAAAC
TATTCAATTG ATATAAGTTT AAGCAGAACA AAGCCAAAAA TTATTAAGAT AAACAATTCC
ACTACCAGTA AACCTGAACT TGCTACTAAT TTTGGCACTA TAGTATTTAC TCCTGATCAG
TTATCAATAA TAAAAGGCTC ACCTAAAGAG AGAAGACGGT TTTTGGATTT GGAATTAGCA
AGTTTTTATC CCCAATATAA ATATTATTTT GTCAACTATC AAAAAGTACT GCTCCAGCGC
AATAATCTTC TAAAAGAGTT AAAAGAAAAA AAACAAGCTG ATACTTTTGA TTTACTGGAA
CTTTGGGACA ATCAATTAAT TAGTTATGGT GCTAAAATCT TAATGGCCAG AATGGAAATT
TTAAAGAAAT TAATCCCAAT GGCTCAGCAG ATTCATAATC AAATAACATC AGATAAAGAA
AAATTAACAA TAAGGTACAG ATCAAGCCTG AATTTAAACA GCAATTTCAG GGAAGAACTA
ATATATGACC AGTTTAGAGA GGTAATATTA AAAAACAGGC AGCAAGATTA CTTAAAAGGC
CAGACAACAG TTGGACCTCA TCGTGATGAT CTGGTTTTTT TGATTAATAA TAAAAATATT
ACGGATTTTG GTTCGCAAGG ACAACAAAGA ACTATTATTT TAACCTTGAA ATTTGCTATA
ATAAATCTTT GGAGTTGCGA GTTAAACGAT GTACCGGTAC TATTGCTGGA TGATGTTTTT
TTTGAATTGG ACAGTAAAAG ACAAAAATAT ATTTTTGATT TATTAAATAA GGATGTTCAG
GTATTTATAA CTTCAACCGG TATGGCTAAT ACTGAGAAAA ATTTAATTAA TATAAAAAAG
AATGCAATAT TTAATGTACG CAGCGGTTTA GTTTGTGAGG AGGAATTATA G
 
Protein sequence
MRIKELFINN FRNYKSLHIK PKENLNIFIG DNAQGKTNIL EAICFLLQGR SFRTSHEKEI 
INFDSEQSKL KTELKAYNQN YSIDISLSRT KPKIIKINNS TTSKPELATN FGTIVFTPDQ
LSIIKGSPKE RRRFLDLELA SFYPQYKYYF VNYQKVLLQR NNLLKELKEK KQADTFDLLE
LWDNQLISYG AKILMARMEI LKKLIPMAQQ IHNQITSDKE KLTIRYRSSL NLNSNFREEL
IYDQFREVIL KNRQQDYLKG QTTVGPHRDD LVFLINNKNI TDFGSQGQQR TIILTLKFAI
INLWSCELND VPVLLLDDVF FELDSKRQKY IFDLLNKDVQ VFITSTGMAN TEKNLINIKK
NAIFNVRSGL VCEEEL