Gene Dtox_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0001 
Symbol 
ID8431390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp31 
End bp1371 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content34% 
IMG OID645032395 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_003189589 
Protein GI258513367 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.08181e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAATA CTAATGTCAA GAATATTTGG GAAGAATTAC TCATTTCTAT AAAGAATAAA 
GTGTCACAAC AATCCTATGA CTTGTGGATA AATTCACTCA ACCCCATTGG ACTGCATAAT
AATGTTCTAA CCATTGAGGT GTCTGACAAC TTTACTAAGG ACTGGATTAA TGACCGTTAC
TATCCTTTAT TAAAGTCTAA TTTAAGAAAT GTATTAAAAA CTGATACTGA TATCCAATTT
ATTCTCGCCG CTGAAGTGGA AAATTACTTA TCCCAACACA GCTTAGAAAA GGTTGAGGAA
GCTAAAGAGG ATATTGAGTA TAACACCAAC CATATCAAAT CAAAATATAC ATTTGATACT
TTTGTAGTAG GTGACAGCAA CAGGTTTGCT CATGCAGCCT GTTTTGCAGT TGCAGAATCA
CCCGCAAAAT CATACAACCC TTTATTTATC TATGGAGGAG TGGGTTTAGG CAAAACTCAC
CTAATGCACG CTATAGCGCA TTATATTTTA ACCCAGGGTA CCGGTTCAAA AGTTGTTTAT
GTAACTTCTG AAAAGTTTAC CAATGAACTA ATTAATTCTT TTCGCGATGA TCAAACCATA
AAATTCCGTA ATAAATACCG CAGCATGAAT ATACTGCTTA TTGATGATAT TCAGTTTCTG
GCTGGTAAAG AAAGAACTCA GGAGGAATTC TTTCATACCT TTAATACATT GTATGAGGCA
AATAAACAAA TTATTATTTC CAGCGACCGT CCACCCAAAG AAATACCTAC ACTGGAAGAC
AGATTGAGAT CTCGTTTTGA ATGGGGTCTA ATAACAGATA TACAAGCTCC TGACTATGAA
ACCAGAATAG CCATCCTAAG AAAAAAAGCT CAAGTAGACA AGCTTTATAT TCCGGATGAA
GTAATAAATT TTATTGCGAC AAAAATAAAA TCCAATATAC GTGAACTGGA AGGGTGTTTA
ATCAGGATTA TTGCCTATGC ATCTTTTACA AAAAAAGAGA TGAACGTGGA ACTGGCTGAA
CAGGTTTTAA AAGATATTTT AAATCCAAAA ACAAAACAAA TAACTGTAGA ATTAATTCAA
AAATCTATAG CGGAACATTT TGAAATAAAA AGTGAAGAGT TAAAGGCAAA AAACAGAAGC
AGAACAATTT CACATCCCAG GCAAATCGCT ATGTATTTAG CCAGAGAGCT AACTGACCTT
TCACTGCCTA AAATAGGTGA AGCCTTTGGC GGACGTGATC ATACTACAGT TTTGCACGCT
CATGAAAAAA TTAAAGAACA AATTAAAAAG GATGGGAAAT TAGAAAATAC ACTAAAAGAG
CTTATAAACA AGCTGCAATA A
 
Protein sequence
MKNTNVKNIW EELLISIKNK VSQQSYDLWI NSLNPIGLHN NVLTIEVSDN FTKDWINDRY 
YPLLKSNLRN VLKTDTDIQF ILAAEVENYL SQHSLEKVEE AKEDIEYNTN HIKSKYTFDT
FVVGDSNRFA HAACFAVAES PAKSYNPLFI YGGVGLGKTH LMHAIAHYIL TQGTGSKVVY
VTSEKFTNEL INSFRDDQTI KFRNKYRSMN ILLIDDIQFL AGKERTQEEF FHTFNTLYEA
NKQIIISSDR PPKEIPTLED RLRSRFEWGL ITDIQAPDYE TRIAILRKKA QVDKLYIPDE
VINFIATKIK SNIRELEGCL IRIIAYASFT KKEMNVELAE QVLKDILNPK TKQITVELIQ
KSIAEHFEIK SEELKAKNRS RTISHPRQIA MYLARELTDL SLPKIGEAFG GRDHTTVLHA
HEKIKEQIKK DGKLENTLKE LINKLQ