Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_R0059 |
Symbol | |
ID | 8425227 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 1779880 |
End bp | 1782822 |
Gene Length | 2943 bp |
Protein Length | |
Translation table | |
GC content | 60% |
IMG OID | 645027822 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.12329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGAAGCTAGG AAGGGCACAC GGTGGATGCC TAGGCGCCAA GAGCCGAAGA AGGACGGGGC GAACGCCGAT ATGCCACGGG GAGCCGTAAG CGGGCTTGGA TCCGTGGATG TCCGAATGGG GGAACCCGCT GGCGGGAAGC GCCAGCAGCT GAGGCCGAAA GGTCTCGAGC GGGGAACCGG GGGAAGTGAA ACATCTCAGT ACCCCGAGGA AGAGAAAGCA AACGCGATTC CGTGAGTAGT GGCGAGCGAA AGCGGAGGAG CCTAAACCGC ATGCGTGGGA AAGGCTGCAG CCGTTGCGCA TGCGGGGTTG TGGGGCTGTT TGCGGCGAGC TGCAGGGTAG CCAGCCCGAG TGTACGCGTA GGAGAACGGT CTGGGAAGGC CGGCCAGAGA CGGTGAGAGC CCGGTATCCG AAACGCGCGC ACGAGGGTGG AAACAGACCC CGAGTACTGC GGGACACGAG GAATCCCGTA GGAATCTGGG AGGACCACCT CCTAAGGCTA AATACTCCTT GGCGACCGAT AGTGAACGAG TACCGTGAGG GAAAGGTGAA AAGCACCGCG GGAGCGGAGT GAAAGAGAAC CTGAAACCGT GTGCCTACAA GCAGTCGGAG CACCGATGGG TGTGACGGCG TGCCTTTTGT AGAATGAACC GGCGAGTGAT GCGGGCGAGC GAGGTGAAGG CGGAGGAGCC AGAGCCGAAG CGAAAGCGAG TCTGAAGAGG GCGCGAGTTC GTCCGCATCG ACCCGAAACC GGGTGATCTA CCCCTGGTCA GGGTGAAGTG CGGGTAACAC CGCATGGAGG CCCGAACCCA CTGGCGTTGA AAAGCCAGGG GATGAACTGG GGGTAGGGGT GAAATGCCAA TCGAACCCGG CGATAGCTGG TTCTCCCCGA AATAGCTTGA GGGCTAGCGT CAGGGGATGA GTTGTGGAGG TAGAGCGCTG ATGGAGTGCG GGGCCCGCGA GGGCTACCAA GCTTCGTCAA ACTGCGAATG CCACAATGTC GAGGAACCTG GCAGTGAGAC TGCGAGCGAT AAGGTCCGTA GTCGAGAGGG AAACAGCCCA GACCCGCAGC TAAGGTCCCG AAGTTCCGGT TGAGTGGGGA ACGATGTGGC GCTGCGAAGA CAACCAGGAT GTTGGCTTAG AAGCAGCCAT CATTGAAAGA GTGCGTAATA GCTCACTGGT CGAGTGGCGC TGCGCGGAAA ATGGAACGGG GCTAAACCGG ACACCGAAGC TCGGGATGGC GACATGGTAG GGGAGCGTTC CATGTGCGGC GAAGCTGAGC CGAAAGGCAA GGTGGAGCGC ATGGAAGTGA GAATGCCGGT ATGAGTAGCG AAAAGAGGGG TGAGAATCCC CTCCGCCGAA AGCCCAAGGT TTCCTGGGGA AGGCTCGTCC GCCCAGGGTC AGTCGGGACC TAAGGTGAGG CCGAAAGGCG TAGCCGAAGG AGAACAGGTT GACATTCCTG TACCACCGTA GGCGTTTGAG CGAAGGGGTG ACGCAGGAGG ACGAGGGAAG CGGCCGGATG GAAGGGGCCG TCCAAGCAGC GAGCGTGGGG TGTAGTGAAA TGCGCACCCC GAGAAGCGTG AGCTGTGATG GGGAGGGAAG GAAAGTACCG AAGTCCCGAC GTTCACACTG CCGAGAAAAG CCTCTAGCGA GCCGAAGGTG CCCGTACCGG AAACCGACAC AGGTGGGCGC GTGGAGAACA CGAAGGCGCG CGGGAGAACT CTCGTTAAGG AACTCGGCAA AATGGCCCCG TAACTTCGGG AGAAGGGGCG CTCTTCCGTG GGGAAGAGCC GCAGTGAAAA GGCCCAAGCG ACTGTTTAGC AAAAACACAG GTCTCTGCGA AGCCGAAAGG CGACGTATAG GGGCTGACGC CTGCCCGGTG CTGGAAGGTT AAGAGGAGGG CTTAGGGGGG AACCCCGAAG GTCCGAATCG AAGCCCCAGT AAACGGCGGC CGTAACTATA ACGGTCCTAA GGTAGCGAAA TTCCTTGTCG GGTAAGTTCC GACCCGCACG AAAGGCGTAA CGACTTGGGC GCTGTCTCAA CGAGAGACCC GGTGAAATTG TAGTACCTGT GAAGATGCAG GTTACCCGCG GTTAGACGGA AAGACCCCGT GGAGCTTGAC TGTAGCCTGA TATGGGACAA CGGTGTTCCA TGTACAGGAT AGGTGGGAGA CGGAGAAGCT TGGGCGCCAG CCTGAGTGGA GTCGGCGTTG GGATACCACC CTTGGGACAC GGTTGTTCTA ACCGGCCTTG TGAGGACGCG AGGCGGGACA GTGTCAGGCG GACAGTTTGA CTGGGGCGGT CGCCTCCTAA AGGGTAACGG AGGCGCCCAA AGGTTCCCTC AGCGCGGATG GAAATCGCGC GAAGCGTGCA AAGGCAAAAG GGAGCTTGAC TGCGAGACGG ACAGGTCGAG CAGGGACGAA AGTCGGGCTT AGTGACCCGG TGGTTCCGAG TGGAAGGGCC ATCGCTCAAC GGATAAAAGC TACCCCGGGG ATAACAGGCT GATCTCCCCC AAGAGTTCAC ATCGACGGGG AGGTTTGGCA CCTCGATGTC GGCTCATCGC ATCCTGGGGC TGAAGTCGGT CCCAAGGGTT GGGCTGTTCG CCCATTAAAG CGGTACGCGA GCTGGGTTCA GAACGTCGTG AGACAGTTCG GTCCCTATCT GCCGCGGGCG TAGGATACGT GAGAGGGGTT GTCCCTAGTA CGAGAGGACC GGGATGAACC GACCGCTGGT GTACCAGTTG TCCCGCCAGG GGCACCGCTG GGTAGCCAAG TCGGGAAGGG ATAAGCGCTG AAAGCATCTA AGCGCGAAGC CCGCCTCAAG ATGACGTATC CCATTCCGAG AAGGAAGTAA GACCCCTCGA AGACGACGAG GTGGATCGGT CTGGCGTGGA AGCGCAGTGA TGCGTGGAGC GGACAGATAC GAATCGGTCG AGGGCTTCAC CTG
|
Protein sequence | |
| |