Gene Aaci_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2780 
Symbol 
ID8426321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2839201 
End bp2840271 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID645028907 
Productpeptide chain release factor 1 
Protein accessionYP_003186173 
Protein GI258512739 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.014775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATC GGTTGGCGAG CATGGAAGAG CGGTACGAAC ACCTGAGCCA GCTGCTCTGC 
AGGCCGGATG TCGCGTCCGA TCCGGAAAAG CTCCGATCGT ACGCCAAGGA ACAGGCGGAG 
CTGGCGGAGA CGGTGGAGGT GTACCGCGAG TGGAAGAAGG TCTCCCAGAA CATCGACGAG 
GCCAAGGCGA TGTTGCAGGA TAAGCTCGAC GACGAAATGC GCGAGTTCGT CAGGGCTGAA 
CTGGCGGAAC TGCAACGTCG GCGGGAGGGC CTGGAGCACC GGCTTAAGAT TCTCCTCCTC 
CCCAAGGATC CGAATGACGA CAAGGACGTG TTTGTGGAAA TTCGCGCTGC GGCCGGAGGC 
GAGGAGGCCG CGCTCTTCGC CGCTGAGCTT TTGCGGATGT ATCAGCGCTA CGCCGAGAAA 
CACGGCTGGA AGACGGAGAT CATCGACGCC AGCTACACGG ATATGGGTGG ATTCCGCGAA 
GTGGTGATGG CCGTGCACGG CAAGGGCGCG TACGCGAAGC TGAAGTTCGA GAGCGGCACG 
CACCGCGTGC AGCGCGTGCC GGTCACGGAG TCGGGCGGGC GGATCCACAC GTCGACGGCG 
ACCGTCGCGG TCCTGCCGGA GGTGGAGGAG GTTGAGGTGG AGATTCACGA AAAGGATCTC 
CGGATCGACA CCTTCTGCTC GACGGGCCCC GGTGGGCAGA GCGTGAACAC CACGCAGTCT 
GCGGTGCGGA TCACGCATCT TCCGACGGGA ATTGTGGTGT CCTGCCAGGA CGAGAAGTCC 
CAATTGAAAA ATAAGGAAAA AGCGATGCGG GTGTTGCGCG CGCGCCTGTA CGAGAAGGCT 
CAGCGCGAAC AGCAGGAGGA GCTCGCGGCA AAGCGGCGCC TCCAGGTGGG CACGGGTGAC 
CGCAGCGAGC GCATTCGCAC GTACAACTTT CCGCAAAGCC GAGTGACGGA TCATCGCATT 
GGCTTGACGT TACACAAACT TGACGCCGTC TTGGACGGTG AGCTGGATGA GATCATCCAG 
GCGCTCATCG TCGAGAGCCA GGCGGAGATG CTGAGGGTCA GGGAAGCATG A
 
Protein sequence
MFDRLASMEE RYEHLSQLLC RPDVASDPEK LRSYAKEQAE LAETVEVYRE WKKVSQNIDE 
AKAMLQDKLD DEMREFVRAE LAELQRRREG LEHRLKILLL PKDPNDDKDV FVEIRAAAGG 
EEAALFAAEL LRMYQRYAEK HGWKTEIIDA SYTDMGGFRE VVMAVHGKGA YAKLKFESGT 
HRVQRVPVTE SGGRIHTSTA TVAVLPEVEE VEVEIHEKDL RIDTFCSTGP GGQSVNTTQS 
AVRITHLPTG IVVSCQDEKS QLKNKEKAMR VLRARLYEKA QREQQEELAA KRRLQVGTGD 
RSERIRTYNF PQSRVTDHRI GLTLHKLDAV LDGELDEIIQ ALIVESQAEM LRVREA