| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2448 |
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| Symbol | |
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| ID | 8425977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2512046 |
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| End bp | 2513941 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645028566 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003185843 |
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| Protein GI | 258512409 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGACTA CGTTACTCGA TTCCATTCAC GACCCAAAAG ACCTGAAGAA GCTCAGCGAG
TCGCAGTTGG TGACGTTGGC TCAGGAAATT CGCGACTTTC TCGTCACGTC CATTTCGAGG
ACCGGCGGGC ATTTCGGCGC CAACATGGGC GTCGTGGAAC TGACTATCGC GCTGCACCGC
GTGTTTGACA GCCCTCGAGA CAAGATCATC TGGGACGTCG GCCACCAGGG GTATGTGCAC
AAGATCCTCA CGGGGCGCAA GGACATGTTT CCGACGCTCC GCAAGCTGGG CGGGCTGGCC
GGATTTTTGA AGCGGTCCGA GAGCGAGCAC GATCCGTTTG GGGCGGGCCA CTCGTCCACG
AGCATCTCGG CCGCTCTTGG CATGGCCGTC GCGCGCGATC TGCGCAATGA GGATTACCAC
GTGATCGCCG TGATCGGTGA CGGGGCGCTC ACGGGGGGCA TGGCGATGGA GGCCATGAAC
CACGCGGGCG ATCTCGGCAC CGATCTCATC GTCATTTTGA ACGACAACGA GATGTCCATC
TCGAACAACG TCGGCGCGGT CTCCAAGTAC CTCACGCGGC TTCGGTCCGA TCCGAATTAC
GCACGCGCCA AGCAGGACAT CGATCACCTC CTGCGCCACC TGAGCAACGT GGGCCAGAAG
GTGACGAAGG TGTTGGATCG CGCCATGGAA GCGGCGCGCC ACATGATCCT GCCCATCACG
CCGTTTGAGG GCTTCGGCTT CAAGTACATC GGTCCCATCG ACGGCCACGA CCTCCGCCAG
CTCATCCCGG TCTTGGAGCG CGTGAAGGAA CTTAAGGGGC CCATCCTGCT CCACGTCCTG
ACGCAAAAGG GCAAGGGGTA TCCGCAGGCG GAGAATTCGG AGGACAAGTG GCACGCGTGG
CCGAGCGCGG CCAAGCCCAA CCAAGCGCCT TCGTACACGA GCGTGTTCGC GCAAACCGTC
GCGGAGATGG CGAGAAAGGA CGAGCGAATC GTCGTGGTCA CGCCCGCCAT GCTGTCGGGC
AGCGGGCTGG TGAAATTTCA GAAGGAGTTT CCGACGCGCA CGTTTGACGT GGGCATCGCC
GAGCAGCACG CCGCGACGTT CTGCGCCGGG CTTGCCGCAG CAGGGAAGCG GCCGATCTTC
GCCGTCTATT CCACGTTCCT GCAGCGCGCA TACGATCAGA CCATCCACGA CATCTGCATC
CAGAACCTCC CGGTGGTGCT CGCGGTCGAT CGCGCCGGGA TCGTCGGCCC GGACGGGGAG
ACGCACCAAG GCGTCTTCGA CATCGCGTAC CTGCGCACGG TGCCGAACAT GTCCATCATG
ATGCCGAAGG ACGAGAACGA ACTTCGGCAC ATGCTGTTCA CCGCCATGCA GCACGACGGA
CCAGTGGCCG TGCGGTACCC GCGCGCGGAC GGCGTCGGCG TGCCCATGGA CGAACCGCTG
CACGCGCTGC CCTGGGGGAA GGCCGAGGTG CTGCGCGAAG GGCGGCATCT CACCATCGTG
GCGCTTGGGC CCATGGTGCC CGAGGCCATG AAGGCCGCAG AGCGCCTCGC CGCCAAGCAT
CAGGTTGAGG CGACGGTCGT GAACCTGCGC TTCGTGAAGC CGCTCGACGA AGAGCTGCTT
CTCAGCTTGG CGAAGACGGG CCGACCCATC CTCACCGTGG AGGAGGCGTC GCTCGCGGGC
GGCATGGGAT CGGCCGTCGC GGAGCTTCTC GTGGATCGCG GCGTCATGGT GCCGATGCGC
CGAAAGGGCG TGCCGGATCA CTTTGTGGAA CACGGCGGCC GCGACGAGGT CCTGCATCGG
CTGGGCCTCG ACGCGGACGG CATCGTGGAG GACGCGCTGG AACTCATGCG CCAAGCCGGT
CAGGTGCCGC ACGCCCTGAA TCGGGTTGGC ACGTGA
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| Protein sequence | MLTTLLDSIH DPKDLKKLSE SQLVTLAQEI RDFLVTSISR TGGHFGANMG VVELTIALHR
VFDSPRDKII WDVGHQGYVH KILTGRKDMF PTLRKLGGLA GFLKRSESEH DPFGAGHSST
SISAALGMAV ARDLRNEDYH VIAVIGDGAL TGGMAMEAMN HAGDLGTDLI VILNDNEMSI
SNNVGAVSKY LTRLRSDPNY ARAKQDIDHL LRHLSNVGQK VTKVLDRAME AARHMILPIT
PFEGFGFKYI GPIDGHDLRQ LIPVLERVKE LKGPILLHVL TQKGKGYPQA ENSEDKWHAW
PSAAKPNQAP SYTSVFAQTV AEMARKDERI VVVTPAMLSG SGLVKFQKEF PTRTFDVGIA
EQHAATFCAG LAAAGKRPIF AVYSTFLQRA YDQTIHDICI QNLPVVLAVD RAGIVGPDGE
THQGVFDIAY LRTVPNMSIM MPKDENELRH MLFTAMQHDG PVAVRYPRAD GVGVPMDEPL
HALPWGKAEV LREGRHLTIV ALGPMVPEAM KAAERLAAKH QVEATVVNLR FVKPLDEELL
LSLAKTGRPI LTVEEASLAG GMGSAVAELL VDRGVMVPMR RKGVPDHFVE HGGRDEVLHR
LGLDADGIVE DALELMRQAG QVPHALNRVG T
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