| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2396 |
|---|
| Symbol | |
|---|
| ID | 8425925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2457508 |
|---|
| End bp | 2459166 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645028515 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003185792 |
|---|
| Protein GI | 258512358 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACT TTCCGGGCCG CACGCTGACG GAAGAGCGTG CCAAGCTGTA CTTCGAAAAG
GGGTATTGGA CCAACGAGTC GTTTGTCGAC GTCTTTTACG AGGACGTGAA GAAGTACCCG
AACTTCGTCC ACCGCGACGA GACGCGTGAG GCGACGTACG AGAAACTGTG GAGCGAAATC
GAGTCCGTGG CCGCCCACCT CTACCGGATG GGCGTGCGCA AGGGGGACAC CGTCGCGCTG
CAGCTGCCGA ACGTGCTCGA CTACGTCGTG GCCGTGTTCG CCTGCGCGCG CATCGGCGCC
ATCGGCGTGT CGCTGCAGAT CGATCTCGGC CGCCAGGCCA TCATCTCGAG CATGCGCACG
TCGCGGGCCA AGGTGTGGAT CATCGCGGAC TACTTCCGCG GCGAGTCGCT CTACGACATG
GCCGTAAGCC TGAAGCCCGA GCTGCCGGAT CTCACGCACA TCGTCGTCCA GGGCGATCCG
GAGCGCGCCC CCGCGGGCGC GACGACGTTC GCCAGCCTGC GAGAGGCCGG GGACAAGCTC
GGCGAGGCGG AGCTTGAGGC CAACAAGCCG GAGGCGCTCG ACGCCTTCCT GATGGTGTTC
ACCTCGGGCA CCACCGGATC GCCGAAGGGC GTGGTGCACC TGCACGCGAA CTACCTCTGG
GCGGCGCGGG CGTACGCGAA GAACTTCGGC TACCAGCCGG AGGAGGCCGT TTTGTGCCTC
GCGCCCATCT GCCATCAGAC GGGCATGCTC GCAGGCGTCA TGATGACCGT CGCGAGCGGC
GGGCGGATCA TGCTGCTGGA TCGGTTCTCC GCGAGCCGCG TGATCGAGTG GATCGAGAAA
TACAGGCCGA CGTACCTCGT GGGCGCGCCG CCGCACGTCA TCCACGTGGC CAACGCGCCC
AACCTGAAGC AGGCGGACAC CTCGAGCGTG AAGCTGTTCA TCTACGCCGG GGCGCCGGTG
CCGAAGGCCG TGCTCGAGCA ACTCCAGCGC GACAGCGGCA TCAAGGTGGG CTGCATGTTC
GGCTGGTCGG AGGGCTTCCT CGCCACCGCC ACGCGGCCGG ACGATCCGCT CGAGGCGCTC
TCGTCCACCG TCGGCTTTGT CATCCCGGGC ACGGAGGTCC GGCTGGTCGA CGAAGAGGGC
AACGACGTCA AGCCGGGCGA GCCTGGGGAG ATGTGGGCGC GTGGCCCGAA CTTCAGCGCG
GGCTACTACC ACAACCCGGA GGCCGCGCGC CGGCAATGGG ACGAGGAAGG CTGGTTCCAC
TCGGGGGACA TCCTGCGCCA GGACGAGAAC GGCCGCTACA TCTTCATCGC CCGGGCGGAC
GACATCATCA ACCGGGGCGG CACGAAGATC GATCCGAAGA CGGTCGAGGA CGCCATCTCA
AAGCACGAGG CGGTGCAAAA CGTCGCGGTG GTCGGCGCGC CGGATCCGAC GCTCGGCCAG
ATGACGGTGG CCTGCGTCAT CCTCAAGGAG GGCGCGAAGC CGTTCACGCT GCGCGAGCTG
CGCGATTTCC TCGCCGAGCA GGGGCTCGCG AAGTTCCAGT TCCCCGACAG GCTGGAATTC
ATGACGGAGT TCCCGCAGAC GCACTCCGGC AAGATCAAAA AGAAGGATCT GCGCGAGCGG
TTTCGGCTCG AGGCCGAGGG CCAAGGAGCC AACGCGTGA
|
|---|
| Protein sequence | MFDFPGRTLT EERAKLYFEK GYWTNESFVD VFYEDVKKYP NFVHRDETRE ATYEKLWSEI
ESVAAHLYRM GVRKGDTVAL QLPNVLDYVV AVFACARIGA IGVSLQIDLG RQAIISSMRT
SRAKVWIIAD YFRGESLYDM AVSLKPELPD LTHIVVQGDP ERAPAGATTF ASLREAGDKL
GEAELEANKP EALDAFLMVF TSGTTGSPKG VVHLHANYLW AARAYAKNFG YQPEEAVLCL
APICHQTGML AGVMMTVASG GRIMLLDRFS ASRVIEWIEK YRPTYLVGAP PHVIHVANAP
NLKQADTSSV KLFIYAGAPV PKAVLEQLQR DSGIKVGCMF GWSEGFLATA TRPDDPLEAL
SSTVGFVIPG TEVRLVDEEG NDVKPGEPGE MWARGPNFSA GYYHNPEAAR RQWDEEGWFH
SGDILRQDEN GRYIFIARAD DIINRGGTKI DPKTVEDAIS KHEAVQNVAV VGAPDPTLGQ
MTVACVILKE GAKPFTLREL RDFLAEQGLA KFQFPDRLEF MTEFPQTHSG KIKKKDLRER
FRLEAEGQGA NA
|
|---|
| |