Gene Aaci_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2306 
Symbol 
ID8425834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2369797 
End bp2371095 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID645028426 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003185704 
Protein GI258512270 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.432824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGC GGAGATTCGC ACAGGTGGCT GGTTGGAGCG CGCTGTGCCT CGCGCTCGCA 
GGCTGTGGCG CAGTGGGCCA TCACGTCGGG CCCACACCTC GTCCGGTGTC TCAGGCACAG
GCGGAACAAG ATGTGGAAAT TTTCAGCTGG TGGACGGCGA AAGGCGAGAC CAACGCGCTC
AACGCCCTCA TTTCCGTCTT TCGCGCTCGC TATCCCCGCG AGCACATCGT GAATGAAGCC
GTGGCGGGCG GTGGCGGCGA CAACGCCAAA GCCGTGCTCG CGAGCCGCAT CACCGCGGGC
GATCCGCCGG AGACCTTTCA GGTCCACGTC GGGCAAGAAC TGATGGTCTG GGTGAAAGCC
GGCAAAATGG AGCCGCTCGA CGCCTTGTAT CGCGAACTTG GCCTGTACAA GGTGTTGCCG
AAGGTCGTGA TGGACGGCGT GACGTACGAA GGCCACGTGT ACGCCGTGCC CATCGACGTG
GAACGAGGCA ACGTGCTGTG GTACAACGCG CGCGTGCTGA ACGAGTACGG GCTCAAGCCG
CCCCAGACGT TTGATCAGTT GCTCGCGGAC TGCAAGGTCC TGAAGGCGCA TGGCGTGACC
CCCATCGCCT ACGGAGATCG GGATCAATTG GGATCCGTGA TGCTGTGGGA GAACGTGTTG
CTCGCGACCG CGGGCCCCAA GACCTATGAC GGCATCTGGA ACGGCACCGT TCCCATCTCG
TCGCCCATCA TCCGCAAGGC GTGCGAGAAC TTTTTGCAGC TGTTGCCCTA CACCAACGCC
GATCACGCGC AGTTGTCGTG GGACGGCGCC TGCGCGCTCG TGGCTTCGGG CCAAGCGGCT
TTCGACGCGA TGGGCGACTG GGCCAAGGCG TACTTCGTGG CCAGCGGTTT GAAGGAAGGG
CGAGACTTTG GCTGGACGCC GTTCCCTGGG ACGAACGGCG ACTTCGAGTA CATCGTCGAC
ACGTTCGGGA TGCCGAAGGG TTCAAAGAAC CCCGAGGGTG CGCTCGATTT TCTGCGCGTC
GTGGCGTCTC GCGAAGCGGA GCGGCAGTTC AATTTATGGA AAGGATCGAT CCCGCCGCGC
AGCGACGTGC CCCTCGCGGG CTTCGACGCG TATAGTCAGG CGTCGGTCGC AGCGTTTCGC
AAGGACGCGC TTGTCCCGAG CCTGGCCAAC GGAGAGGCTG CCAATCCTGC GTTCGAGCAG
GCGGCAGCCC AAGCCATCAC GTTGCTCATC AACACGGGCA ATGTGAGTCA GTTCATGCAG
CTCCTGAAGC AGGCCGACCT GGCCAATCCG TTGCCGTGA
 
Protein sequence
MAQRRFAQVA GWSALCLALA GCGAVGHHVG PTPRPVSQAQ AEQDVEIFSW WTAKGETNAL 
NALISVFRAR YPREHIVNEA VAGGGGDNAK AVLASRITAG DPPETFQVHV GQELMVWVKA
GKMEPLDALY RELGLYKVLP KVVMDGVTYE GHVYAVPIDV ERGNVLWYNA RVLNEYGLKP
PQTFDQLLAD CKVLKAHGVT PIAYGDRDQL GSVMLWENVL LATAGPKTYD GIWNGTVPIS
SPIIRKACEN FLQLLPYTNA DHAQLSWDGA CALVASGQAA FDAMGDWAKA YFVASGLKEG
RDFGWTPFPG TNGDFEYIVD TFGMPKGSKN PEGALDFLRV VASREAERQF NLWKGSIPPR
SDVPLAGFDA YSQASVAAFR KDALVPSLAN GEAANPAFEQ AAAQAITLLI NTGNVSQFMQ
LLKQADLANP LP