Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2282 |
Symbol | |
ID | 8425810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2343977 |
End bp | 2345806 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645028402 |
Product | ABC transporter related |
Protein accession | YP_003185680 |
Protein GI | 258512246 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGTTGA AGCAAGACGT TCAAGGCAGT GGCGAGGCGC TCCTTCGGGC ACCGTTTATC TACCGAGACG ATGAGGCGCT CGAGAAAAAG CTGCAGCTGT CGCTCATCCT GCGGCTCGCC TCCTACATGC GGCCCTATCC GAAGCTCATT GCGTTTGCGC TTCTCGCGAC GGGCGGCAAT CTCGTCGTGA CGCTGCTCGC GCCGTATCTG GTGGGCCCAG CGGTCGACGC GCTCGTCGGC GGTCGCCATT CGCACGTGCT GTTCGAGTAT GCGGCGGCGC TCGTCGCGCT GTATCTCCTC AACTTCGCCG CGTCGTTCTG CCGGATCGAC CTCACCAACC GACTCGGGCA GCGCGTCATT CAGCGTTTGC GCGATGAGCT GTTTGTCCAC GTGCAGGGGC TGTCATCCGA CTTCTTCGAT GCGCGCCCCG CGGGCTCCAT CCTGGTCCGC ATCCTGAACG ACGTGAATTC GCTTCAGGAC CTATTTACCA ACGGCGTCAT CAATTCGATC ACGAACGTGT TCACGTTGAT TGGCATCATC GCCATCATGT TCTCGCTCAA CTGGCAGCTC GCGACGGTCG CGCTCGTCGT CGTGCCGTTC ATGTTCGTCC TGTCGCTGCG GCTGACCGTT CAAATCCGCC GCGCCTGGCA GCAGGTCCGC CTGCGCCTGA GTCGCCTGAA TGCGCACCTG GCGGAAGCCA TTCAGGGCAT GCGGGTGACG GAGGCGTACG TCCGCGCGGA CGAAAACCAG CGATTCTTCG AGGACATGAA CCGCGATTAC ATGCGGACCT TCCTGCGCGC GCAGCGGTTC AGCATCCCGT TCGGTCCGTT GGTGGATCTC ACCGGTGCCC TTGGATCGGC GCTGCTCTTC TGGTACGGCG TTCATCTCGT GCACACGGGC GTGGTCACCG TGGGGCTTCT CGTCGCGTTC GCGAACTATC TGGGCAGCTT TTGGACGCCC ATCAGTCAGC TCGGGCAACT GTACAACCAG GTACTCGTCG CGATGGCGTC GTCGGAGCGC ATTTTCCAAT ATCTCGACAC CCGGCCGACG GTGACGGACC GCGGCGTCGT GCGGGAGCTG CCGCCTGTGC GGGGGCACGT CGAGTTCTGC CATGTCACCT TCGCCTACCA GCCGTCCCGC CCCGCCATCG AGGACGTCTC GTTCGTCGCG CGCCCGGGCG AGACCATCGC GCTCGTCGGC CACACGGGCG CCGGCAAATC CACGGTGGTC AACCTGCTCG CTCGCTTCTA CGATCCGACC TCGGGCGAGA TCCGAATTGA CGGGCACGAC CTCCGCTCCG TTTCGCTCGC CAGCCTGCGC CGACAGATGG GCATGGTGCT GCAGGAGACG TTCCTCTTCT CCGGGACGCT CATGGACAAC ATCCGCTACG GCCGACCGAA TGCGACGGAC GAGGAGTGCA TTGCGGCCGC CAAGGCCGTG TACGCGGATG AGTTCATCCG TCGCCTCCCG GACGGTTACT TCACCGAGGT CCAGGAGCGC GGGACTCGGC TGTCCCAGGG GCAGCGTCAG CTCATCTCAT TTGCGCGAGC CATCCTCGCC GATCCCAGGA TTCTCATTCT CGACGAGGCC ACGGCGAGCA TCGACACCTA CACCGAGCAC CTCATTCAGC GGGCGCTCAA GGTGCTCCTC CAAGGGCGGA CTTCGTTTGT CGTCGCGCAC CGGCTGTCCA CGATTCGCGA GGCGGATCAA ATTCTCGTGT TTGACGGCGG TCGCATCGTC GAACGCGGCC GGCACGATGA CCTCATGCGC CGCCGCGGCG CCTACTACAA GCTCGTGCAG GCGCAGTACC GAAGCATGAT GGAAGGATGA
|
Protein sequence | MALKQDVQGS GEALLRAPFI YRDDEALEKK LQLSLILRLA SYMRPYPKLI AFALLATGGN LVVTLLAPYL VGPAVDALVG GRHSHVLFEY AAALVALYLL NFAASFCRID LTNRLGQRVI QRLRDELFVH VQGLSSDFFD ARPAGSILVR ILNDVNSLQD LFTNGVINSI TNVFTLIGII AIMFSLNWQL ATVALVVVPF MFVLSLRLTV QIRRAWQQVR LRLSRLNAHL AEAIQGMRVT EAYVRADENQ RFFEDMNRDY MRTFLRAQRF SIPFGPLVDL TGALGSALLF WYGVHLVHTG VVTVGLLVAF ANYLGSFWTP ISQLGQLYNQ VLVAMASSER IFQYLDTRPT VTDRGVVREL PPVRGHVEFC HVTFAYQPSR PAIEDVSFVA RPGETIALVG HTGAGKSTVV NLLARFYDPT SGEIRIDGHD LRSVSLASLR RQMGMVLQET FLFSGTLMDN IRYGRPNATD EECIAAAKAV YADEFIRRLP DGYFTEVQER GTRLSQGQRQ LISFARAILA DPRILILDEA TASIDTYTEH LIQRALKVLL QGRTSFVVAH RLSTIREADQ ILVFDGGRIV ERGRHDDLMR RRGAYYKLVQ AQYRSMMEG
|
| |