Gene Aaci_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2277 
Symbol 
ID8425805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2338789 
End bp2339754 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content50% 
IMG OID645028397 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_003185675 
Protein GI258512241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.455143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT GGACAGCGAT GTTGGCAGTA GGTGTCGTAG CGGCAGGCGT ACTGGCCGGA 
TGTGGTACGT CCGTGTCAAC AGGTTCACAG AAAACAAATC TTTCGAACAC CGGGACAGCA 
AGTACGAAGC CAATCAAGCT GGGATTTGCA GTATCGACCC TAAACAATCC ATTCTTCGTT 
GCAATGTCAA ACGGAGTTCA GGAAGAGGCT AAAAAATTGG GTGTTCAGGT CACGATCCTG 
AACGGCAACA ACGATCCTGC AACACAGTTA AACCAAGTGG AAGATCTTAT CCAACAGCAC 
GTCAACGCGA TTATTTTGAA CCCGACCGAC AGCCAGAGCT TGTCGACGGC AGTGGAACAA 
GCAAATCGCG CGCACATCCC TGTCATTACG CTCGACCGCA GTGTGACGAA GGGCAATGTG 
GCATGTTTCA TCGCATCGAA CAGTGTGGAA GCGGGCAAGA TGGCTGCTGA TGAATTGATC 
AAAGCGCTAG GAGGCAAGGG CCAGGTCGTC GAATTGCAAG GTGTGATCGG AACTTCTGCA 
GAAGCCGATC GGGAAAAAGG GTTTGATGAA GAAATCGGAA AGGCACCTGG TATTCGCGTT 
GTGGCACGCC AAACAGCAAA TTTCGATCGC AGTCAAGCGC TGAATGTCAT GCAGAATATT 
TTACAGGCTC ATCCAAATAT TCAAGGTGTG TTTGCACAAA ATGACGAAAT GGCGCTTGGT 
GCATTAAAGG CGATTCAGGA AGCCGGAAAG CACAACATCA AAATTGTTGG GATCGATGGC 
GAAAAGGAGG CTGTGAATGA CGTCCATAAG GGCCTCTTGT ACGCGGATAT TGCTCAACAG 
CCGGTGCAAG AGGGCATATT GGGAGTGGAA TATGCGGTGA AACTCGTCGA AGGCGAAAAG 
GTTCCGAAGC AGGTGAATTC ACCGCTGCAT CTAGTTGAGA AGAACACTCC GTTCACCGGG 
TTCTAA
 
Protein sequence
MKRWTAMLAV GVVAAGVLAG CGTSVSTGSQ KTNLSNTGTA STKPIKLGFA VSTLNNPFFV 
AMSNGVQEEA KKLGVQVTIL NGNNDPATQL NQVEDLIQQH VNAIILNPTD SQSLSTAVEQ 
ANRAHIPVIT LDRSVTKGNV ACFIASNSVE AGKMAADELI KALGGKGQVV ELQGVIGTSA 
EADREKGFDE EIGKAPGIRV VARQTANFDR SQALNVMQNI LQAHPNIQGV FAQNDEMALG 
ALKAIQEAGK HNIKIVGIDG EKEAVNDVHK GLLYADIAQQ PVQEGILGVE YAVKLVEGEK 
VPKQVNSPLH LVEKNTPFTG F