Gene Aaci_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2258 
Symbol 
ID8425786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2316679 
End bp2318454 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content59% 
IMG OID645028378 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003185656 
Protein GI258512222 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000752385 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTC AGAATAAGCG TCGGTGGTCG ACGCGGCTTG GAGCAGCGGC CGTCACTGTG 
GCGCTGGGCG CCGGTATCAT CGCGGGCTGT GGAACGCAGC AGAATACGTC GTCGAACTCC
ACCACGAACA GCACGCAGAC CACCACCCAA CAACCCCAGA AGGGCGGCAC GCTCGTGGTA
GCTCTCGCGC CGTCCACGAA CATCAACTGG TATTTGCCGC TGACGAATTC GGCTAACGCG
AGCGTTTACA ACGCAGCATT GCAAATTCTT CTCTATCCGG GCGTCATCTA TATTGGCAGC
AACTACGCCA TTGATTGGAA CGACAGCTTT GCCAGCAGCA TCGATTACAA CGCCTCAGGT
ACGGTGTACA CCATTCACCT GAAGAAGAAC TGGGTGTGGT CGGACGGCAA ACCTGTGACC
GCGCAGGATG TTGTATGGGA CTACGACTTG ATCAAAGCGA CGGACGAGTC GAACGTGCCG
CCTTGGCCCA ACTACGCCGC TGGTTCCGGC GGTGTGCCGG CGAACGTCAA GAGCGTCGTC
GCGCTCGACA AGTACACGGT GCAGATCACG CTCAAGAAGC CCGCGAACCA GCAGTGGTTC
ATCTACAACG GCATCGGTCA GCTCACGGCT TTGCCTGAGC ACGCATGGAA CAAGTACCCC
AACAATATGG CGCAGGAGAT CGCGTACCTT GGCAAAGAGG CCACCAATCC GAGCTTCTTC
ACCGTGGTGG ATGGGCCTTT CAAACTCGTG AGCGCGAAGC AGAGTCAGGC GTGGGTGCTT
GTTCCAAACC CGACGTTCGC GGGTCACAAG AGCACGCTGG ATAAGCTCAT CTTCCAGTAC
GAGGGCTCGG CCGACGCAGA GTTTGCCGCG CTTCGCAGTG GCGCCGTGAA CTTGGGATAT
CTCGATCCGG CGCAGTGGGC GTCTCGCGGC AGCCTGCTGA AGATCGGCTA CAAGATTGTG
CCTGCCTACA ACTTTGGCTA CGATTTCATC GAGTTGAACC TGCAGAAGGG TTCGCCGCTC
TATAGCGCGT TCAACGACCT GAAGGTCCGC GAGGCGCTGG AGTACGCGAT GAATCAGAAT
GAGATTGACC AGGACATCTA TCACGGGTTC GCGCCGCCCC TCTACGGGCC GATTCCCGCG
CAGCCGAAGA CGGTGTTCTA CGATCCCTCG CTCAACAATC TGTTCGCTTA CAACCCGGCG
AAGGCGAAAC AGCTGCTCGA GTCGGACGGC TGGAAGTTGG AAAACGGCGT CATGACGAAG
GACGGCCAGA AGCTCGAGTT CACCATGCTC GTCTCCTCCG GATCTGAGTC GACGCTGCAG
GAGGCGGAGC TCGTGCAGCA GGACTGGAAG CAAATCGGCG TGGACGTGAC GCTGCAGCAG
ATGCCGTTCA ACCAGGAAAT TGGGATCATG AGCGACACCA AGAACCCCGG CAAGTGGGCG
GCGGCGGCCG GCACGGGCAT CACGTACGGC GGATCCTATC CATCCGGCGA GCAGTTGTTC
GAGCCCGGCG GCCTGGACAA CTTCGGTTAC AACGATCCGA CGGCCGACAA GCTCATCGCG
AAGACGACGG AGCCGGTCTC CTCGCAGGCC GAGAACATGA AGAACTTCTT CGCGTACGAG
GACTATATCG CGAAACAGCT ACCCGTGCTG TGGCAGAACG TCCCGGCCAA CATCACGGTT
ATCGCCCCAA ACGTGCACAA TGCCACGACG CAGGTGCTCA ATCCGACAAC CGGGTATTCG
CTCCTCAACT ACATCTGGAT GTCCTCCAGC AAGTGA
 
Protein sequence
MARQNKRRWS TRLGAAAVTV ALGAGIIAGC GTQQNTSSNS TTNSTQTTTQ QPQKGGTLVV 
ALAPSTNINW YLPLTNSANA SVYNAALQIL LYPGVIYIGS NYAIDWNDSF ASSIDYNASG
TVYTIHLKKN WVWSDGKPVT AQDVVWDYDL IKATDESNVP PWPNYAAGSG GVPANVKSVV
ALDKYTVQIT LKKPANQQWF IYNGIGQLTA LPEHAWNKYP NNMAQEIAYL GKEATNPSFF
TVVDGPFKLV SAKQSQAWVL VPNPTFAGHK STLDKLIFQY EGSADAEFAA LRSGAVNLGY
LDPAQWASRG SLLKIGYKIV PAYNFGYDFI ELNLQKGSPL YSAFNDLKVR EALEYAMNQN
EIDQDIYHGF APPLYGPIPA QPKTVFYDPS LNNLFAYNPA KAKQLLESDG WKLENGVMTK
DGQKLEFTML VSSGSESTLQ EAELVQQDWK QIGVDVTLQQ MPFNQEIGIM SDTKNPGKWA
AAAGTGITYG GSYPSGEQLF EPGGLDNFGY NDPTADKLIA KTTEPVSSQA ENMKNFFAYE
DYIAKQLPVL WQNVPANITV IAPNVHNATT QVLNPTTGYS LLNYIWMSSS K