Gene Aaci_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2216 
Symbol 
ID8425744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2275480 
End bp2276166 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID645028336 
ProductABC transporter related 
Protein accessionYP_003185614 
Protein GI258512180 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.126053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCC TCGTGGGCGT GACGAAGTCG TATACCGTGG GCGATCAGGT CGTTCCCGTG 
CTGAAGGGCA TTCACCTCGA GGTTCAGAGA GGCGAGTTCG TCGCGGTCAT GGGCCCCTCG
GGCAGTGGCA AATCCACGCT CATGCACATC CTCGGGCTCT TGGACCGGCC GAGTTCGGGC
GACTATGAAC TGAACGGCGC GTCGGTGCTT CACCTGGCCT CGAACGATCT CGCCCGCCTC
CGCAATCAGA ACATCGGGTT CGTGTTTCAG AATTTTCACC TCATCCCGCG CATGTCCGCG
GTGCGCAATG TGGAACTTCC GATGGTCTAC GCAGGCGTGC CTCGCGCCAA GCGGCGAGCG
CGAGCCATGG AGCTGCTCGA GATGGTCGGC ATGGCGAACC GCGCGCATCA CCTGCCGAAT
GAGCTGTCGG GAGGCCAGCG GCAGCGCGTC GCGATCGCCC GCGCGCTCGC CAACGACCCC
TCCATCCTGC TCGCCGATGA ACCTACCGGC GCGCTCGATC AGCAGACGGG CGCCGAGATC
CTCCGCATTC TCCGGGATCT CCACGCGGCC GGCCGCACGG TCATGGTCAT CACGCACGAT
CCCCACGTTG CGCGCGCCGG CAAACGCGTC CTGCACATGG TCGATGGCGA GATCGTGCGA
GAGGAGGTGC CGGATGAGCC TCGATGA
 
Protein sequence
MIRLVGVTKS YTVGDQVVPV LKGIHLEVQR GEFVAVMGPS GSGKSTLMHI LGLLDRPSSG 
DYELNGASVL HLASNDLARL RNQNIGFVFQ NFHLIPRMSA VRNVELPMVY AGVPRAKRRA
RAMELLEMVG MANRAHHLPN ELSGGQRQRV AIARALANDP SILLADEPTG ALDQQTGAEI
LRILRDLHAA GRTVMVITHD PHVARAGKRV LHMVDGEIVR EEVPDEPR