Gene Aaci_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2210 
Symbol 
ID8425738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp2270794 
End bp2271276 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID645028330 
Producthypothetical protein 
Protein accessionYP_003185608 
Protein GI258512174 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00461361 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT GGTTCCTCAC CGCAGCCGCG GCGGCCTGCC TCGTATCGGC CTGCTGGTGG 
CAAGCGCCCG CGCACGTTCT CGCTGCTCCG GCCGTGGAGT CGGCCGAGCC GAACGCACCC 
GTCAACGGGC CTTCTCACCA ATTCGAAATC CATTCGAGCG TTCAGGTCTC ACGCGAGACC 
CTCCGCGAAG CATATCAGGC CAGCCACGAC GCGTATACAA AAAAATTGCA GAAGTACGCC 
AAGTGCACCG AAGCGCAGGC GCGCAAGGCC GTGATGTCGG AACACCCGGG TTGCAAGATC 
GAGGATATCC AGCTTCGCAA CATCCGCACG AATCTGGTGT ATATGGCGAT CGCGCGCGAT 
GACGAGGACA AGTACCTGGT CATTGTGGAC GCGGGCAACG GCAATATTCT GCTGGATCGA 
CGCATTCCGA CACACCACGA GCGCGTGTTT GCGGGCGCAC CGGTTCCGAG CCGGAACGAA 
TAA
 
Protein sequence
MKRWFLTAAA AACLVSACWW QAPAHVLAAP AVESAEPNAP VNGPSHQFEI HSSVQVSRET 
LREAYQASHD AYTKKLQKYA KCTEAQARKA VMSEHPGCKI EDIQLRNIRT NLVYMAIARD 
DEDKYLVIVD AGNGNILLDR RIPTHHERVF AGAPVPSRNE