| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2177 |
|---|
| Symbol | |
|---|
| ID | 8425699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2238348 |
|---|
| End bp | 2240165 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645028291 |
|---|
| Product | peptidase M3A and M3B thimet/oligopeptidase F |
|---|
| Protein accession | YP_003185575 |
|---|
| Protein GI | 258512141 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA GATCGCGCAG TGAAGTTCCG GAACACGAGA CGTGGGATTT GACGCCTCTG
TTTGCCAACG TGGAGGCGTG GGAAGAAGCG GTCCGGCGCG TGCGCCAGCT TGCGGACGAG
ATCGCCGTGA TGGCCTCGAA GTCATTCGGC GGACCGGCCG ACGTGGCTCG CGCGTTGGCG
TTGCACGACG ACATGTTGCG ACTTGGCACC GACGTGGAGC GGTACGCCAT GAGCAAGTTC
GCGGAGGACG CCACGGACCA GGGGGCGCAG CGGCTGATGT CGATGGCGCA ACTCGCGCTG
GATCGCGTGG GAGAAGCGGC CGAATCGCTG GTGGCGGCGC TCTGCCGCGT GCCGGAGGGC
GATCTCGCCG CGTGGCGGGC GGACGAAGCC CTGCGGCCGT ACGCGCCGTA TTTCGGCGAG
ATCGACCGCG AGCGCAGGCA TCGGCTCGCC GACGAAGCGG AGAAGGTGCT CGCCGCCAAT
TCGTCGGCCT TCTCGCTTCC TTCCGGAATC TACGAAGCGG CGACGGGTGC GGATATGCGG
TTTGAGCCGG TCCGGGACAG CGACGGGCGC GAAGTGGGCG TGACGCCCTC CGCGCTTCTG
ATGCACATCG AGACGTCGCA CGACACGGTG CTCCGTCACC GCGCCTACGA CAGCGTGGTG
AATGGGCTCC GGCCGTATCA GCATACGCTC GCGCGATCGC TTGGGGCCAA GATTCAAAAC
GACGTGGTGG CGGCGCGCCT GCGCGGCTTC TCGAGCGTGT TCGAGATGTT GCAGAGCACG
CGGCTCGGCG GCACCATGGC GGCCAATCAG GTCCCTCCGG AGCACTATTT CATGGTGCAG
GACGTCATGA TGAACGAACT CGCCCCGCAC ATGCGCCGCC TGGCGCAGCT TCGCAAACGG
GCGATGGGCC TCGAGAAGGT CAGGTTGTGC GACACGAAGG CCCCGTTCGT GCGCCTGACG
GACACAGAAC TCACGTTTGA CGATGCGCGG GAGCTGATTT TGGAGGCGGC CCGCCCGCTC
GGGGATACGT ACGGCGACAT CCTGCGGCGC GCGTTCGAGG AACGGTGGAT TTACTGGGCG
CGCAACCGCG GCAACTGGAA CGGCGCGTTT TGCGGGGAGT CGAGCGTCCA TCCGTACGTG
TTTTCGCCGT TTGAAGGCGG CATGTACGGC GTCTTCGTCA TGGCGCACGA GCTCGGCCAC
GCCGTTCACC TTCATCTCGC GTGTCAGAAC GAGCGCCCCT CCAACCTGTC GTTCTCGAAT
CTGTTCATCG AGACGCCGTC CACGCTCATG GAACACATGG TGGCCAACGC GCTCATCCGG
CGCGCGAAAG ACGACGCGGC CCGCGCCAAG GTGCGGATGA TGCAGATGTT CACGTTCCAC
CACGATTTCG TCACCCACCA GACGGAGGCC GAGATCCTGC GGCGGCTCTA CACCATCGCG
GATCGGGGCG AGCCGCTCTC GACCGATGTG TTTCGCCGAG TGTCCCGCGA GGTGCTGGCC
GACTTCTGGC AGGACGCGGT CGATCTCGAC GAGGGCGCGG ATCTCTACTG GATGCGCCAG
CCGCACTACT ACATGGGTCT GTATCCGTAC ACGTACGCCG TGGGGCTCGC GGCGTCCACC
CTCCTCGCCG ATCGAATCCT CGCGGGGGAC GACGAGGTCC TGGCGCGCTG GATCGAGGTG
TTGCGCGTGG GAGGCGGCAA GACGCCGCTT GAGCTGTTCG CGCACGTGGG CCTCGACATG
GGCGATCCGT CGCCCTACCG AGAGGCCATT CGCAAGGTGG GCGAGATCGT CGACGAGTTG
GAGCACGCGT TCACCTGA
|
|---|
| Protein sequence | MALRSRSEVP EHETWDLTPL FANVEAWEEA VRRVRQLADE IAVMASKSFG GPADVARALA
LHDDMLRLGT DVERYAMSKF AEDATDQGAQ RLMSMAQLAL DRVGEAAESL VAALCRVPEG
DLAAWRADEA LRPYAPYFGE IDRERRHRLA DEAEKVLAAN SSAFSLPSGI YEAATGADMR
FEPVRDSDGR EVGVTPSALL MHIETSHDTV LRHRAYDSVV NGLRPYQHTL ARSLGAKIQN
DVVAARLRGF SSVFEMLQST RLGGTMAANQ VPPEHYFMVQ DVMMNELAPH MRRLAQLRKR
AMGLEKVRLC DTKAPFVRLT DTELTFDDAR ELILEAARPL GDTYGDILRR AFEERWIYWA
RNRGNWNGAF CGESSVHPYV FSPFEGGMYG VFVMAHELGH AVHLHLACQN ERPSNLSFSN
LFIETPSTLM EHMVANALIR RAKDDAARAK VRMMQMFTFH HDFVTHQTEA EILRRLYTIA
DRGEPLSTDV FRRVSREVLA DFWQDAVDLD EGADLYWMRQ PHYYMGLYPY TYAVGLAAST
LLADRILAGD DEVLARWIEV LRVGGGKTPL ELFAHVGLDM GDPSPYREAI RKVGEIVDEL
EHAFT
|
|---|
| |