Gene Aaci_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2104 
Symbol 
ID8425626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2160680 
End bp2162269 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content64% 
IMG OID645028219 
Productstage V sporulation protein B 
Protein accessionYP_003185503 
Protein GI258512069 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID[TIGR02900] stage V sporulation protein B 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.624718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCGCC AAACGTTCCT GCAAGGCGCG CTGGTGCTCA TGATTGCCGG CATCGTGACG 
CGCATCATGG GATTTATATA CCGAATCGTA TTGACGCGCC TCATCGGCGC AGAGGCCATG
GGCCTGTTTC AAATCGTCTT TCCCATTTTG GGGCTTGCGC TCACCTTTGT CACGATGGGG
TTTCCGCTAG CCATCGCGAA ACTGGTGGCC GAGGCAGTGG CCAAGCGAGA CGTGGACCGC
GTTCGCCGCG TCATGCGCAT CTCCTCCGCA TGTGTACTGA CATCCGCCGC CCTCTGCATG
GGCGTCATGT ACGCGTTCCG TCACGTCGTC GCGCAATACT GGCTCACCGA CCCAAGAGCG
TACCCCACGT ATCTCGCCAT GATCCCCGTG GTGGGCGTGA TTGCCGTGGC AAGCCTATAC
CGCGGCTATT TCCAGGGAAT TCAGGACATG ACCCCGACCG CGTGGGCGTC CATCCTGGAG
CAATCCGTGC GCATCATCAG CATATGGGCA TTGGCCGCAT ATTTCGTGCG GTTCTCGTTG
GCATATGCCG CGATGGCGGC GATGGTCGGG ATGGTTCTGG GTGAGCTGTC CGGACTCTTG
TTTCTCATCT GGCAGCAGCG GCGGCGCGCG CGCATGGATC AGGTCGTGCC AGAACCTGCG
TACGCGCGCA CATCGGAGCC GATGCGAGCG ACGCTCCGGG CCATCACGCA GCTGTCGCTG
CCCGTCACCG CGAGCCGGCT CATCTGGTCG CTCTTGTCGG CAACCGAACC CATCCTGGTC
CTGCGCGCGC TGGGGATGGC GGGCGTGCCG CTCAAGCAGG CCACGGCCTT GTACGGCGCG
TATTCGGGCA TGGCCATTCC GCTGCTCGTC TTCCCGACCG TGGTGACGTC CTCGCTCGCA
ACAAACCTGG TGCCGGCCGT GGCGGAGGCC CAAGCGTCGG GGAACGTGGA ACGGATTCGA
CACCGGCTGT CGCAGAGCAT TACCGTCACG GCGATGGTCT CGTTTCCGGC CTCCATCGTC
TTCACCTTTT TTGCGGCGCC GCTCACCAGG GCCATCTATG GAGACGCTCA CGTCGGCCCG
ATGTTGGCCA TCATGGCGCC TTTTGTGTTC ATGCTCTGCC TTCAATCGCC TTTGACGGGG
ATTTTACAAG GGCTCAACCG CGCGGGAACG GCGATGGTCA ACTCCATCGT GGGCGGCGTG
GCGCGGCTGG CCGTCATCCT GGTGCTCGCC ACACGCCCTT CGCTCGGCAT TCTCGGCGTG
AGCATCGCCA CCGCGTTTTC GTTCACGCTC ACCGCCGCGC TTCACCTGAT CGCCGTCGTT
CGGGAAATCG GATTTCAGAT GCGGACCACC TCCGTCGTGC GCATTGGCGT CGCCTCCGCC
GCGATGCTCG CGTACATGCT CCTGATCACG TTCCGGGCAG GCTCGTCCCT TTCTGGGTCA
GCTCTCCTGC TGGCGCTCGT GGGCGGACTG ATGCTCTACT TCGCGCTGCT CTGCTCGCTC
CGCGTCCTCA CCTCGCGCGC CGTCGAGCGC GTGCCCAAGG TGGGACCCTG GCTTGCCGCG
GTCGTCCGGC ATCTTCCGTT CGCGATCTGA
 
Protein sequence
MSRQTFLQGA LVLMIAGIVT RIMGFIYRIV LTRLIGAEAM GLFQIVFPIL GLALTFVTMG 
FPLAIAKLVA EAVAKRDVDR VRRVMRISSA CVLTSAALCM GVMYAFRHVV AQYWLTDPRA
YPTYLAMIPV VGVIAVASLY RGYFQGIQDM TPTAWASILE QSVRIISIWA LAAYFVRFSL
AYAAMAAMVG MVLGELSGLL FLIWQQRRRA RMDQVVPEPA YARTSEPMRA TLRAITQLSL
PVTASRLIWS LLSATEPILV LRALGMAGVP LKQATALYGA YSGMAIPLLV FPTVVTSSLA
TNLVPAVAEA QASGNVERIR HRLSQSITVT AMVSFPASIV FTFFAAPLTR AIYGDAHVGP
MLAIMAPFVF MLCLQSPLTG ILQGLNRAGT AMVNSIVGGV ARLAVILVLA TRPSLGILGV
SIATAFSFTL TAALHLIAVV REIGFQMRTT SVVRIGVASA AMLAYMLLIT FRAGSSLSGS
ALLLALVGGL MLYFALLCSL RVLTSRAVER VPKVGPWLAA VVRHLPFAI