Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2104 |
Symbol | |
ID | 8425626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 2160680 |
End bp | 2162269 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645028219 |
Product | stage V sporulation protein B |
Protein accession | YP_003185503 |
Protein GI | 258512069 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.624718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCCGCC AAACGTTCCT GCAAGGCGCG CTGGTGCTCA TGATTGCCGG CATCGTGACG CGCATCATGG GATTTATATA CCGAATCGTA TTGACGCGCC TCATCGGCGC AGAGGCCATG GGCCTGTTTC AAATCGTCTT TCCCATTTTG GGGCTTGCGC TCACCTTTGT CACGATGGGG TTTCCGCTAG CCATCGCGAA ACTGGTGGCC GAGGCAGTGG CCAAGCGAGA CGTGGACCGC GTTCGCCGCG TCATGCGCAT CTCCTCCGCA TGTGTACTGA CATCCGCCGC CCTCTGCATG GGCGTCATGT ACGCGTTCCG TCACGTCGTC GCGCAATACT GGCTCACCGA CCCAAGAGCG TACCCCACGT ATCTCGCCAT GATCCCCGTG GTGGGCGTGA TTGCCGTGGC AAGCCTATAC CGCGGCTATT TCCAGGGAAT TCAGGACATG ACCCCGACCG CGTGGGCGTC CATCCTGGAG CAATCCGTGC GCATCATCAG CATATGGGCA TTGGCCGCAT ATTTCGTGCG GTTCTCGTTG GCATATGCCG CGATGGCGGC GATGGTCGGG ATGGTTCTGG GTGAGCTGTC CGGACTCTTG TTTCTCATCT GGCAGCAGCG GCGGCGCGCG CGCATGGATC AGGTCGTGCC AGAACCTGCG TACGCGCGCA CATCGGAGCC GATGCGAGCG ACGCTCCGGG CCATCACGCA GCTGTCGCTG CCCGTCACCG CGAGCCGGCT CATCTGGTCG CTCTTGTCGG CAACCGAACC CATCCTGGTC CTGCGCGCGC TGGGGATGGC GGGCGTGCCG CTCAAGCAGG CCACGGCCTT GTACGGCGCG TATTCGGGCA TGGCCATTCC GCTGCTCGTC TTCCCGACCG TGGTGACGTC CTCGCTCGCA ACAAACCTGG TGCCGGCCGT GGCGGAGGCC CAAGCGTCGG GGAACGTGGA ACGGATTCGA CACCGGCTGT CGCAGAGCAT TACCGTCACG GCGATGGTCT CGTTTCCGGC CTCCATCGTC TTCACCTTTT TTGCGGCGCC GCTCACCAGG GCCATCTATG GAGACGCTCA CGTCGGCCCG ATGTTGGCCA TCATGGCGCC TTTTGTGTTC ATGCTCTGCC TTCAATCGCC TTTGACGGGG ATTTTACAAG GGCTCAACCG CGCGGGAACG GCGATGGTCA ACTCCATCGT GGGCGGCGTG GCGCGGCTGG CCGTCATCCT GGTGCTCGCC ACACGCCCTT CGCTCGGCAT TCTCGGCGTG AGCATCGCCA CCGCGTTTTC GTTCACGCTC ACCGCCGCGC TTCACCTGAT CGCCGTCGTT CGGGAAATCG GATTTCAGAT GCGGACCACC TCCGTCGTGC GCATTGGCGT CGCCTCCGCC GCGATGCTCG CGTACATGCT CCTGATCACG TTCCGGGCAG GCTCGTCCCT TTCTGGGTCA GCTCTCCTGC TGGCGCTCGT GGGCGGACTG ATGCTCTACT TCGCGCTGCT CTGCTCGCTC CGCGTCCTCA CCTCGCGCGC CGTCGAGCGC GTGCCCAAGG TGGGACCCTG GCTTGCCGCG GTCGTCCGGC ATCTTCCGTT CGCGATCTGA
|
Protein sequence | MSRQTFLQGA LVLMIAGIVT RIMGFIYRIV LTRLIGAEAM GLFQIVFPIL GLALTFVTMG FPLAIAKLVA EAVAKRDVDR VRRVMRISSA CVLTSAALCM GVMYAFRHVV AQYWLTDPRA YPTYLAMIPV VGVIAVASLY RGYFQGIQDM TPTAWASILE QSVRIISIWA LAAYFVRFSL AYAAMAAMVG MVLGELSGLL FLIWQQRRRA RMDQVVPEPA YARTSEPMRA TLRAITQLSL PVTASRLIWS LLSATEPILV LRALGMAGVP LKQATALYGA YSGMAIPLLV FPTVVTSSLA TNLVPAVAEA QASGNVERIR HRLSQSITVT AMVSFPASIV FTFFAAPLTR AIYGDAHVGP MLAIMAPFVF MLCLQSPLTG ILQGLNRAGT AMVNSIVGGV ARLAVILVLA TRPSLGILGV SIATAFSFTL TAALHLIAVV REIGFQMRTT SVVRIGVASA AMLAYMLLIT FRAGSSLSGS ALLLALVGGL MLYFALLCSL RVLTSRAVER VPKVGPWLAA VVRHLPFAI
|
| |