| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2102 |
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| Symbol | |
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| ID | 8425624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2158892 |
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| End bp | 2160193 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645028217 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003185501 |
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| Protein GI | 258512067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.459213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGG GGCGCCTCTT GGCGTTTCTC GCGATGGTGG TTGTCGTACT CGGCCTCACC
ATCAGCACAG GTCCAAAGAT ATGGAAATCA ATACCTCTCG GCCTCGATTT GAAGGGTGGC
GTGGACCTGC TCTATGCAGT GGATACACCG AAGGGCCATC CACTCGACAG CACGGGCAAA
GCGGCGCTCG TTCGCGCGAT TGAAATGCGC GTGAACTCGC TCGGCGTGTC GTCGCCCATC
ATTCAACTCG AGGGCCGCAA TCAACTCGGA CAAGATCAGA TTCGCGTGGA AGTCGCGGGC
GTGAAGAATC AACAGGAGGC CGTGAGTGTC ATTGGCGCCA CGGCGCAGCT CGCCATCTAC
GGGAGCGCCA AGATTGACCC CAAGACCGGA AAGATTGTCC CGGTTGGGCC ACCGCTTGCG
ACCGGAGCGG ACCTCAAGTC GAATGCCCAC TGGGTGGTGG ATCAACAGAC GGGTCAGAAC
GCCGTCGCGA TCGAGTTCAA GAACGCGAGC CTCTGGACAA GCATCACCAA GCGGTATTTG
CAGAAACCCA TCTACGTGTT TCTCAACGGC CAGTTGCTGA CCAACCCGGT CGTCGAGCAG
GTGATGTACA CAGGGCAGAG CGAGATTTCT GGTGGCAATC TGACCACGCC GCAGGCGTGC
ATCGATCTCG CCAATGAACT CAATGCGGGC GCCTTGCCCT ATCCGCTCAC GCTCGAAAGC
GAGACGAGCG TCGGGCCCAC GCTTGGGGCC ACCAGTCTGC ACCGGACGCT CATCGCGGGC
GTCATCGCAG TGGTACTCAT CTTCGCGTTC ATGATCGCCG CGTATCGCAT GGCGGGGCTG
ATTGCCGACA TCGCATTGGT GGCGTACGGC TACCTCACAC TCCTGACGTT CGCCGGCCTG
CACGTCGTGT TGACGCTGTC GGGGCTTGCT GCCCTCATCC TTGGCGTCGG CATCGCCGTG
GATGCGAATA TCATTACGTA TGAGCGAATC AAAGATGAGG TGCGAAACGG GCGCAGCCTG
CGATCCGCCG TGCGCATCGG CAATAAGAAC GCGTTTCGCA CCATCGTCGA CTCCAATGCG
ACCACGTTCA TCGCAGGTCT CATCATGTAT ATCTTCGGCG GCGAAGGCGA TGTCCGCGGA
TTCGCTGTGG CGCTGATGGT GGGCATCATC GTGAGCCTTT TGACGGCCGT GCTGTTTGCC
CGGGCAATGT TGTTGACGTT CACGGCGGCG CAGGCGGTCA AGAATCCTTG GTGGTACGGC
GCGCCGAGAG GGGTGGTGAA GAGCCGTGAA GCCAAGGTTT GA
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| Protein sequence | MKWGRLLAFL AMVVVVLGLT ISTGPKIWKS IPLGLDLKGG VDLLYAVDTP KGHPLDSTGK
AALVRAIEMR VNSLGVSSPI IQLEGRNQLG QDQIRVEVAG VKNQQEAVSV IGATAQLAIY
GSAKIDPKTG KIVPVGPPLA TGADLKSNAH WVVDQQTGQN AVAIEFKNAS LWTSITKRYL
QKPIYVFLNG QLLTNPVVEQ VMYTGQSEIS GGNLTTPQAC IDLANELNAG ALPYPLTLES
ETSVGPTLGA TSLHRTLIAG VIAVVLIFAF MIAAYRMAGL IADIALVAYG YLTLLTFAGL
HVVLTLSGLA ALILGVGIAV DANIITYERI KDEVRNGRSL RSAVRIGNKN AFRTIVDSNA
TTFIAGLIMY IFGGEGDVRG FAVALMVGII VSLLTAVLFA RAMLLTFTAA QAVKNPWWYG
APRGVVKSRE AKV
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