Gene Aaci_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2056 
Symbol 
ID8425578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2105720 
End bp2106853 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content64% 
IMG OID645028172 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003185456 
Protein GI258512022 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.232194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTTG ATCTCACCTC GGAACAAAAG ATGATTCGGG ATACGGTGCG CGAGTTTGCG 
GAGGCCGAGA TCGCGCCTCA CGCCGCGGAA TGGGATAGGA CGGAGCACTT CCCCATCGAG 
GTGTTTCGCA AGATGGGCGA ACTCGGCTTT CTCGGCCTGC CCATTCCGGA GGAATACGGT 
GGCGCGGGCG CCGACATGAT CTCGTACTGC CTGGCGGTGG AGGAGATCGG GCGCGCGTGC 
GGCGGAACAG GGCTCAGCTA CGAGGCGCAC GTGTCGCTCG CGTGCACGCC CATTCTGCTC 
TACGGGACGG AGGAGCAGAA ACAGAAGTAC CTGGTGCCTA TGGCGCGCGG CGAGGCGCTC 
GGTGCGTTTG GTTTGACGGA GCCCGGGGCT GGATCGGACG CCGGAGGAAC GCGGACGACC 
GCCGTCCTGG AGGGCGACGA ATGGGTCATC ACCGGCAACA AGATCTTCAA CACAAACGGC 
GGCTATGCGA AGTACGTCGT GCTCACCGCG GTGACGGATC CGGCGTCGCG CGGCATCAGC 
GCGTTCATCG TGCCGACAGA TGCCGAGGGC TTCTCGGTGA GCAAGCCGTA TGAGAAACTG 
GGCATGCGGG CGTCGAACAC GGTCGAACTG ATTCTCGATC ACGTCCGCGT TCCGAAGGAG 
AACCTACTCG GGCCGCTGAA CGCTGGGTTC AAGCAGTTTC TCTCGACGCT GGACGGCGGA 
CGTGTCGCCA TCGCAGCTCT GGCGGTCGGG ATCGCGCGGG CGGCGTTTGA GACGGCTCTC 
GCGTACGCCA AGACGCGCGT CCAGTTCGGG CAGGCCATCA GCAAGTTCCA GGCGATTCAG 
CACAAGCTCG CCGACATGGC CATGCACATC GATCTCGCCC GGAATGCGGT GATGAAGGCC 
GCGTGGCTGA AGGATCAGGG CCGGCCGTAC ACGCTGGAGG CGTCGTACGC CAAGCTGTTT 
GCGTCCGAGA TGTGCACGCG GACGTGCGAG CAGGCGATTC AGATCTTGGG CGGGTATGGC 
TACATGCGCG AATACCCGGT GGAGCGCCAC TATCGCGACG CGAAGTTGAT CGAGATCGGC 
GAGGGCACGT CGGAGATCCA GCGCCTGGTG ATCGCGCGCC AGCTGGGCTG TTAG
 
Protein sequence
MDFDLTSEQK MIRDTVREFA EAEIAPHAAE WDRTEHFPIE VFRKMGELGF LGLPIPEEYG 
GAGADMISYC LAVEEIGRAC GGTGLSYEAH VSLACTPILL YGTEEQKQKY LVPMARGEAL 
GAFGLTEPGA GSDAGGTRTT AVLEGDEWVI TGNKIFNTNG GYAKYVVLTA VTDPASRGIS 
AFIVPTDAEG FSVSKPYEKL GMRASNTVEL ILDHVRVPKE NLLGPLNAGF KQFLSTLDGG 
RVAIAALAVG IARAAFETAL AYAKTRVQFG QAISKFQAIQ HKLADMAMHI DLARNAVMKA 
AWLKDQGRPY TLEASYAKLF ASEMCTRTCE QAIQILGGYG YMREYPVERH YRDAKLIEIG 
EGTSEIQRLV IARQLGC