Gene Aaci_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1992 
Symbol 
ID8425514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2038903 
End bp2040318 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content66% 
IMG OID645028109 
ProductMiaB-like tRNA modifying enzyme 
Protein accessionYP_003185393 
Protein GI258511959 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.130467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGACGG TGGCGTTTCA CACCTTGGGC TGCAAGGTGA ACTTCTATGA CACCGAAGGG 
ATATGGCAGA CGTTCAAGCG GCGCGGCTAT ACGCAGGTTC CGTTTGACAG CGTGGCGGAC
GTGTACGTCG TCAACACGTG CACCGTCACG CACACGGGCG ATCGCAAGAG CCGGCAGATG
ATCCGCCGCG CCGTGCGAAC CAATCCCGAC GCGGTCGTGG TGGTCACGGG CTGTTATGCC
CAGATCGCGC CCGACGAGAT CGCGCGCATT CAGGGCGTGG ATCTCGTCGT GGGCAACGAT
CAGAAGTCGA AGATCGTCGA CCACGTCGAG GCCGTTCTGG CGGAGCGGAA GCCGTACCTG
GCGGTGGGCA ATATCATGCA GGCGACCGAG TTCGACGAGC TCGACGTGCC GTACTTCGAG
GAGCGATCGC GCGCCAACCT GAAGATCCAG GACGGCTGCA ACAACTTCTG CACCTTTTGC
ATCATTCCGC GCGCGAGAGG GCTCATCCGC AGCCGCAAGC CGGAGAACGT CGTGCTGCAG
GCCACGAAGC TCGCGCGCGC GGGCTATCGC GAGATTGTGC TCACTGGCAT CCACACGGGC
GGTTACGGCG AGGACTTTGA GAATTATCGC CTGGCGGATC TGCTGCTCGA TCTCGAGCGC
ATCGATCTGC CGTTTCGCAT CCGCATCAGC TCAATTGAGG CGAGCGAGAT CGACGATCGC
CTGATGGATG TGCTCGCGGC GTCGAAGAAG GTCGTGCCGC ACCTGCACAT CCCGCTCCAG
GCGGGCTCCG ACCCGGTGCT CAGGCGCATG CACCGGCATT ACACGACGGC CGAGTACGCC
GAAAAGCTGC GGGAACTTCG GCGCCGGCTG CCCGATCTCG CCGTGACGAC GGACGTGATC
GTCGGTTTCC CGGGCGAGAC GGACGAGCAG TTCGGGGAGA CGTACGCGTT TGTGCGCGCG
CAGGGGTACG CGCAACTGCA CGTGTTTCCG TATTCGCCGC GGCGGGGCAC TGCGGCGTAC
AAGTTCAAGG ATCAGGTGCC GGAGGACGTG AAGCGAGCGC GCGTCGCGCG GATGATCGCG
CTCGGAGACG ACCTGCGCCA GGCGTACGCC GCCTCCTTCG TGGGGCGAGA GCTCGAGGTC
ATCGCGGAGT CGCCGCTCGC GTCGGCGGAC GACGAGGCGC GCCGCGCGTA CAGCCACCTT
CCGGAGGCGT CCCGCATGCT CGTGGGCTAT GACGGGCACT ACCTCCGCGT GGCGTTCGAG
GCGCCCTCGG ACGTGCCGCT GGAGTCGATG ATCGGCGAGG TCATCCGCGT CCGGATGACC
GGCGTCGGGC CGGGCGTGCA CCGGGCGGTG TTTCTCGAGC AGGTGACGTT CCCCGACGAA
GAGCAAGCGA TGGAATGGGG GCGGATGACG TCGTGA
 
Protein sequence
MPTVAFHTLG CKVNFYDTEG IWQTFKRRGY TQVPFDSVAD VYVVNTCTVT HTGDRKSRQM 
IRRAVRTNPD AVVVVTGCYA QIAPDEIARI QGVDLVVGND QKSKIVDHVE AVLAERKPYL
AVGNIMQATE FDELDVPYFE ERSRANLKIQ DGCNNFCTFC IIPRARGLIR SRKPENVVLQ
ATKLARAGYR EIVLTGIHTG GYGEDFENYR LADLLLDLER IDLPFRIRIS SIEASEIDDR
LMDVLAASKK VVPHLHIPLQ AGSDPVLRRM HRHYTTAEYA EKLRELRRRL PDLAVTTDVI
VGFPGETDEQ FGETYAFVRA QGYAQLHVFP YSPRRGTAAY KFKDQVPEDV KRARVARMIA
LGDDLRQAYA ASFVGRELEV IAESPLASAD DEARRAYSHL PEASRMLVGY DGHYLRVAFE
APSDVPLESM IGEVIRVRMT GVGPGVHRAV FLEQVTFPDE EQAMEWGRMT S