Gene Aaci_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1929 
Symbol 
ID8425450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1979412 
End bp1980353 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content67% 
IMG OID645028045 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003185330 
Protein GI258511896 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGGGG CTGTCGCAGT GGTACGCAGA ATGCGCTCGA TGGCGCAGGG AAACCGATTT 
CGGCGTTTTC GCGGCATCGG GCTTGCGCTC TTAGGTTCCA TTCTCTGGGG TGTCTCCGGC
ACGGCGGCGC AGGTCCTCTT CCAGGCGGAT CACGTCAATC CCGCCTGGCT CGTCGCGGTG
CGCATGGTTG TCGCGGGTGT GCTCCTGCTC GCGGCGTGCT GCTTCAAAGA GGGTGTGCAG
GCCTTCGCGC CGTGGCGCGC GCCGCACTCC GCCGTCCGGA CGGCCGTCTT CGGTTTAGCC
GGGCTCCTCG GCGTGCAGTA CACCTATTTC GCAGCGATTC ACGCGGGCAA CGCGGCCACG
GCGACCGTGC TCCAGTACAT GGCGCCCATC GTCATCGTCG GGTACGCGTC CGCGCGATCC
CGCCGGGCCC CAACCGCACT CCAAATCATC TGTGTGGGTT TGGCGCTTCT CGGCTGCCTG
TTGCTCGTCA CGAATGGCCA CATCGAGCGG CTGGCTGTTT CGGGGGCGTG CGTGGCATGG
GGGCTCCTTT CGGCGGTTGC AGTCGCCATC TACAGCATCT TTCCGGTACC GCTCATCGCC
GCGTTTGGCC CGTTGTCGAT CACGGCGTGG GGCATGCTGG TGGGCGGCGC TGCGGTGGGG
CTCGCGACCG CGCCATACCT CCCGGTGCCC CACCTCTCCG CGGAGGCGTG GTGCTTGGTG
GCCTTCGTGG TGGTGTTCGG GACGCTGATA CCCTTTTACC TGTACCTGGC GAGCCTTCGC
GACATCACCC CGGCGGACGC GAGCCTCGTC GCGAGCGGCG AGCCGCTGGC GGCGACTGCG
CTCGCTGTGA CCGTGCTGCA TCAGCCCCTG ACCTGGGCTG CGCTACTTGG CATGGGTTGT
GTCCTTTTGA CCGTGACGCT TTTGGCGCGG GCGAAGTCCT AG
 
Protein sequence
MSGAVAVVRR MRSMAQGNRF RRFRGIGLAL LGSILWGVSG TAAQVLFQAD HVNPAWLVAV 
RMVVAGVLLL AACCFKEGVQ AFAPWRAPHS AVRTAVFGLA GLLGVQYTYF AAIHAGNAAT
ATVLQYMAPI VIVGYASARS RRAPTALQII CVGLALLGCL LLVTNGHIER LAVSGACVAW
GLLSAVAVAI YSIFPVPLIA AFGPLSITAW GMLVGGAAVG LATAPYLPVP HLSAEAWCLV
AFVVVFGTLI PFYLYLASLR DITPADASLV ASGEPLAATA LAVTVLHQPL TWAALLGMGC
VLLTVTLLAR AKS