Gene Aaci_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1908 
Symbol 
ID8425429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1955987 
End bp1956883 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content61% 
IMG OID645028024 
ProductNLP/P60 protein 
Protein accessionYP_003185309 
Protein GI258511875 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTCTC GAATCGCAGC AAGCGTAGGT TGGTTGGCCG CGTGCCTGGG GGTTTCCTTC 
GTACCGGCCA CGGCGTTGGC TTCGTCCGCG ACGTACACCG TGCGCGCTGG CGACAGCCTC
TACGGAATCG CGGCCAAGTT TCATGTGACT GTCCGCCAAT TGGAGTTGTG GAACCATCTT
TCGTCCGACG TCATTCACCC TGGGCAGGTC CTCGTGGTCT CCCAAGGCGG TTCCACCTCT
GCATCGTCGT CTGCACCTTC CTCGTCCCGC TCAGAAGCGT CCACGTACGT CGTTGAGCCT
GGTGACTCGC TGTGGTCCAT CAGCGAGAAG TTTCACATCA CCGTGTCGCA GCTCGAAGCG
TGGAACGGCC TGACCTCGTC CAGCGCCATC CACCCCGGCG AATCGCTCCG GGTTTCGAGT
CCGAAGGCCC TTTTCTCCTC CGTGAACTCT GCCGCCAAAC CAGCGTCTCT GTCCAGCCGC
GGAAGTTCGC CCGGGTCGTG GAATGCGCCC CTCACCCAGA GCGCGCTTGG GTTTGCAGTG
GCCGACTATG CGCGGACTTT CCTCGGAGAT CCGTACGAGT GGGGGGCGAA TGGCCCATCG
GCCTTCGACT GCTCAGGATT GATTCAGTAC GTTTATGCCC ACTTTTACAT TCAGCTGCCG
CGGACGAGTT ACGCGCAGTA TGAGGTGGGC GTCCCGGTTT CTGAGGGTGA TCTGGAACCG
GGGGATATCG TGTTTTTTGA TACATACGGG AGCGGCCCGT CACACGACGG GATCTATCTC
GGCAATGGCC AGTTCATCAA TGCGGCGAGC ACGTCCGTCG AGATCGACAG CCTGTCGGAT
CCGTATTGGG CCGACCACTA CATCGGCGCC CGCCGGGTCA TCGGGCAGAA CGGGTGA
 
Protein sequence
MRSRIAASVG WLAACLGVSF VPATALASSA TYTVRAGDSL YGIAAKFHVT VRQLELWNHL 
SSDVIHPGQV LVVSQGGSTS ASSSAPSSSR SEASTYVVEP GDSLWSISEK FHITVSQLEA
WNGLTSSSAI HPGESLRVSS PKALFSSVNS AAKPASLSSR GSSPGSWNAP LTQSALGFAV
ADYARTFLGD PYEWGANGPS AFDCSGLIQY VYAHFYIQLP RTSYAQYEVG VPVSEGDLEP
GDIVFFDTYG SGPSHDGIYL GNGQFINAAS TSVEIDSLSD PYWADHYIGA RRVIGQNG