| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1904 |
|---|
| Symbol | |
|---|
| ID | 8425425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 1951924 |
|---|
| End bp | 1953141 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645028020 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_003185305 |
|---|
| Protein GI | 258511871 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCGC TCAATAGCTT CGCAGTTCTC GAATGGATTC GCAAGATGCA AGACGTGGAT
CAGATCGATT TTTTACGGGA ATTGATGCAA CTCGTGACGC AGTTCCTCAT CGATGCGGAA
GCCGCAGAGA AAATCGGTGC CGAGCGCTAT GAGCGGACGG AGAGCCGTGT CACACAACGA
AACGGCTATC GTTCAAGGGC CTGGGACACG CGCCTCGGGA CGGTCGATTT GAAGATTCCA
AAGCTCCGTC AGGGCAGCTT CTTCCCTTCC ATTCTGGAGC CCAGGCGTCG AGCGGAACAA
GCGCTGGCTT CTGTGATCCA GGAAGCGTAC GTGAAGGGCG TGAGCACCCG CAAGGTCGAT
GACCTGGTGC GAGCGTTGGG CCTGGATGGC ATTAGCAAAA GCGAGGTGTC TCGCCTCTGC
CAGCTCATCG ATGAAGAGGT TCGCCAGTTC AAGGAGCGGC CGCTCGAGCG TGAGTATCCG
TACGTGTGGC TGGATGCCAC GTTCCCGAAG GTGCGGGAGG GCGGCCGCGT GCAGAGCATG
GCGCTGGTCA TCGCCATTGG CGTCACGGAC ACCGGAGAGC GCGAAGTACT CGGATTCGAT
GTCGGAACGA GCGAGGACGG CGCGTTCTGG TCGGACTTTC TGCGCAGCCT GAAGGCGCGA
GGTCTTCGGG GCGTGCGTCT GGTGGTGAGC GATGCGCACG CAGGCTTGCG CCAGGCCATT
TCGGAAGTGC TGACGGGCGC GACGTGGCAA CGCTGCAAAG TGCACACGAT TCGGAACGTG
TTGAGCCAAG TGCCGAAGAG GGAGCAGTCG ATGGTGGCCT CGATCATCCG GACGATCTTC
ACCCAGCCCA CGCAAGAAGC GGCCCGCGAG CAGCTTCGCC GAGTGGTCGC GGAACTCCGG
GGGCGTTTCC CGAAGGCGAT GGACATTTTG GAGGCAGCAG AGGAGGACGT GCTGGCCTTT
ATGGCGCTAC CTATCGAGCA CTGGCGGCAG ATCTGCTCGA CCAACCCGCT CGAGCGGCTC
AATCGAGAGA TGCGTCGGCG GATGGACGTC GTGGGGATTT TCCCGAATCG AGCATCGGTA
GTGCGCCTCG CTGGAGCGAT TTTGCAAGAG CAGCACGAAG AGTGGCTGGT GTCGCGGCGA
TATTTCAGCC TGGAGTCGAT GGCGAAACTC AAGCCCAACC GTCCGTTCCT CGCAGCCGAG
GCGATGTTGC AAAAATAA
|
|---|
| Protein sequence | MASLNSFAVL EWIRKMQDVD QIDFLRELMQ LVTQFLIDAE AAEKIGAERY ERTESRVTQR
NGYRSRAWDT RLGTVDLKIP KLRQGSFFPS ILEPRRRAEQ ALASVIQEAY VKGVSTRKVD
DLVRALGLDG ISKSEVSRLC QLIDEEVRQF KERPLEREYP YVWLDATFPK VREGGRVQSM
ALVIAIGVTD TGEREVLGFD VGTSEDGAFW SDFLRSLKAR GLRGVRLVVS DAHAGLRQAI
SEVLTGATWQ RCKVHTIRNV LSQVPKREQS MVASIIRTIF TQPTQEAARE QLRRVVAELR
GRFPKAMDIL EAAEEDVLAF MALPIEHWRQ ICSTNPLERL NREMRRRMDV VGIFPNRASV
VRLAGAILQE QHEEWLVSRR YFSLESMAKL KPNRPFLAAE AMLQK
|
|---|
| |