Gene Aaci_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1887 
Symbol 
ID8425407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1935824 
End bp1936354 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID645028002 
ProductATP-cone domain protein 
Protein accessionYP_003185288 
Protein GI258511854 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGCC CGTATTGCGG AGCGGACAAC ACGCGCGTCA TCGAGTCGAG GCCCGGAGAG 
GATGGGACGA CGATTCGTCG GCGGCGCGAG TGCATTCATG AGGCCTGCGG GCGGCGCTTT 
ACCACCTATG AGCGGGTGGA GCAGCGGCCG CTCATGGTCG TGAAAAAGGA CCAGAAGCGG 
GAAGAGTTTT CGCGCGACAA GCTGTACCGC GGCATCATGA AGGCGTGCGA AAAGCGTCCC 
ATCCCTGCGG AGACGCTGGA GGCGGTGTGT GACGAGATCG AGCGAAAGCT GCGGCTCGAG 
TACGAACGCG AAGTGCCGTC TTCGGTCATC GGGGAGCGCG TGATGGATGC GCTCCGGGAG 
CTCGACGGCG TGGCGTACGT GCGATTCGCG AGCGTGTATC GGGAATTTCG CGATGTCGAG 
ACGCTGCTGA AGGAAGTGCT TGCGCTCATC GGCGATCGGG CGCGCGCGGT GGAACGGCCG 
GCGCAGGCGG ACAAGCCCTC CGGCGACGGA ACGTCGTTCG CGCGTGGATA G
 
Protein sequence
MKCPYCGADN TRVIESRPGE DGTTIRRRRE CIHEACGRRF TTYERVEQRP LMVVKKDQKR 
EEFSRDKLYR GIMKACEKRP IPAETLEAVC DEIERKLRLE YEREVPSSVI GERVMDALRE 
LDGVAYVRFA SVYREFRDVE TLLKEVLALI GDRARAVERP AQADKPSGDG TSFARG