| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1864 |
|---|
| Symbol | |
|---|
| ID | 8425381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 1913377 |
|---|
| End bp | 1915209 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645027976 |
|---|
| Product | excinuclease ABC, C subunit |
|---|
| Protein accession | YP_003185265 |
|---|
| Protein GI | 258511831 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCAGG TCATTCGAGA CAAGCTGGAC CTGTTGCCGC AGCGGCCCGG CGTCTACCTC
ATGAAGGGTG AGGGCGGCGA GATTCTTTAC GTGGGCAAGG CCAAGGTGCT GCGGAACCGC
GTGCGTTCGT ACTTCACGGG GACGCATGAC ACGAAGACGC AGGTGTTGGT TTCGCAGATC
CGCGACTTCG AGTACATCGT GACGGACACC GTCGCGGAGG CGCTGCTGCT CGAATGCAAC
CTGATCAAAC AGCACCAGCC GCCGTACAAC ATCATGCTGC GGGACGACAA GTCATACCCG
TACATCAAAC TTACCAAGGA GCGGCACCCG CGGCTGCAGA TTGTGCGCCA GGTCAAGCGG
GACGGCGCGA AGTATTTCGG GCCGTATCCC AACGCCACGT CGGCGCAGGC CACGAAGCGG
CTGTTGGATC GGCTGTATCC GCTGCGCAAA TGCAAGACGC TCAAGAAGCA GGTCTGCCTG
TACTATCACA TCCACCAATG CCTCGCGCCG TGCGTGTACG ACGTGGATGA AGCGACGTAT
GAAGCCATGG CCAAGGAGAT CAGCCACTTT TTGAACGGCG GGCACCAGGA TGTCGTGCGC
GAGCTCGAGC AGAAGATGCA GGCGGCGGCG GAGTCGCTCG AGTTTGAACG AGCCGCGGAA
CTTCGCGATC TGATTCGCCA TATCGAGCAG GTGATGCAGG AGCAGAAGGT CACGTGGACG
GACGGGATCG ACCGAGACGT GTTCGGCTTC GCCGAAGACC GCGGGCTGCT GAGCGTTCAG
GTGTTTTTTG TGAGGAACGG GAAGCTCATC GAGCGGCAGG TGCAGATCGC GCCGCACTTC
GACGATCCGC TGACGGACTT CATGTCGTTC GTGGAGCAGT TTTACCACGA ACGGGTGGAT
CTTCCGAAGG AAATTCTGCT GCCCGAGGGC GTGCCCAGCG AGGCCCTCGC GATGGTCGTC
GATGCGAAGG TGTTGCAGCC GAAGCGCGGC CCCAAGCGGG ATCTGGTCGA TCTCGCCTGT
GAAAACGCCC GCCAGGCGCT GGCGGAGAAA ATACAGCTGA TCGACCGCAA TCTGGACCGC
ACGCTTGGCG CGGTGATGGA ACTGGGACAG GTGCTCGCCA TCCAGCCTCC CCGGCGGATT
GAGGCGTTCG ACAATTCCAA CTTCCAGGGC GTCGACGCGG TGTCGGCGAT GGTCGTGTTC
ATCGACGGCA AGCCCGCCAA GTCGGAGTAC CGCAAGTACA AGATTCGGTC CACCCAGGGG
CCAGACGATT ACGAGGCGAT TCGGGAAGTC GTGAGAAGGC GCTACAGCCG GCTCGTCCGC
GAGCAGAAGC CGCTGCCCGA TCTCGTCGTG ATCGACGGCG GGAAGGGCCA GTTGCGCGCG
GCGTTGTCCG TCCTCGAGGG CGAGCTTGGG CTCGAGATCC CCGTCTGCGG TCTGGCGAAG
GACGAACGCC ATCGCACGAG CCAGTTGTTC TTCATGGACG AGGAAGAGCC TGTGCGCATC
GAGAGACACA GCCCGGCGTT TTACCTGCTC GAGCGCATCC AGGACGAGGT CCATCGATTC
GCGGTAGAGT TTCACCGGTT GAGGCGCAGC AAGACCGGAT TTCAGTCCAT CCTGGACGAG
ATTCCTGGCG TGGGGCCGGA ACGGAAAAAG GCCATTCTCC GCCGGTTTGG CAGCCTGAAG
GCCGTTGCGG CGGCGCAGCC GGAGGACTTC CGCGGCCTTG GCATCGGCGA CAAACTCGCG
CGGGAGATTG TGGCCAGGGT GCGGGAAGAG CTTGCCGCTC GGAAGCAGGC GGATGGCGAG
ATGGAAATTT CGTCCGAGGC ACCGTTTTCT TGA
|
|---|
| Protein sequence | MNQVIRDKLD LLPQRPGVYL MKGEGGEILY VGKAKVLRNR VRSYFTGTHD TKTQVLVSQI
RDFEYIVTDT VAEALLLECN LIKQHQPPYN IMLRDDKSYP YIKLTKERHP RLQIVRQVKR
DGAKYFGPYP NATSAQATKR LLDRLYPLRK CKTLKKQVCL YYHIHQCLAP CVYDVDEATY
EAMAKEISHF LNGGHQDVVR ELEQKMQAAA ESLEFERAAE LRDLIRHIEQ VMQEQKVTWT
DGIDRDVFGF AEDRGLLSVQ VFFVRNGKLI ERQVQIAPHF DDPLTDFMSF VEQFYHERVD
LPKEILLPEG VPSEALAMVV DAKVLQPKRG PKRDLVDLAC ENARQALAEK IQLIDRNLDR
TLGAVMELGQ VLAIQPPRRI EAFDNSNFQG VDAVSAMVVF IDGKPAKSEY RKYKIRSTQG
PDDYEAIREV VRRRYSRLVR EQKPLPDLVV IDGGKGQLRA ALSVLEGELG LEIPVCGLAK
DERHRTSQLF FMDEEEPVRI ERHSPAFYLL ERIQDEVHRF AVEFHRLRRS KTGFQSILDE
IPGVGPERKK AILRRFGSLK AVAAAQPEDF RGLGIGDKLA REIVARVREE LAARKQADGE
MEISSEAPFS
|
|---|
| |