Gene Aaci_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1825 
Symbol 
ID8425340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1869277 
End bp1869978 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID645027935 
ProductDNA repair protein RadC 
Protein accessionYP_003185226 
Protein GI258511792 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTGG ACTGGGATGT TTGTGTTGCG TCGGAGTTGG AGGATGGACC GCGCGAGCGC 
CTGATGCGGC TCGGACCGAG CGCGCTGCGC GTGGACGAGC TTTTGGCCTG CATCATGCAG
TCGGGCAACG GGAAGCAGAA CGTGTACGAG ATCGCGCAGT CGCTCTGTCG ACATCTGGGC
GATCTCGACA GGCTTGCGGA TCTCGAGGTG GCGGAGCTGT TGAGCGTGCC CGGAATCGGG
CCGGCGAAGG CCGTTCAAAT CGCGGCGGCG GTCGAGTTGG GACGTCGCGT GGCCCGAAAG
CCGCCGGGCG AAAAGCGGCA GATCCGCACC GCGGAAGACG CCGCAAAGTA TGTCATGGAC
CGACTGAGGT ATCTTAAAAA GGAACATTTT GTAACTCTTC TTTTGGACAC GAAGCATCGA
GTCCTGGCTG AAGATACGTC GTCCGTGGGC AGCCTGGATG CTTCTATCGT ACATCCGCGC
GAGATCTTTC GCCGCGCGAT CCGCATCAGC GCTTCGAGCA TCTTGTGCAT ACATAATCAC
CCCAGTGGCG ACCCATCTCC TAGCCCTGAA GATATTGCGG TCACAAAGCG TCTCGTCGAG
GCGGGGCGGG TGCTCGGCAT CGAGGTGCTG GACCATATCG TGATTGGCGA CGGGCGATTT
GTCAGTTTGC GCGCGGAAGG GTATTTGGAT TCTACTTCAT GA
 
Protein sequence
MDVDWDVCVA SELEDGPRER LMRLGPSALR VDELLACIMQ SGNGKQNVYE IAQSLCRHLG 
DLDRLADLEV AELLSVPGIG PAKAVQIAAA VELGRRVARK PPGEKRQIRT AEDAAKYVMD
RLRYLKKEHF VTLLLDTKHR VLAEDTSSVG SLDASIVHPR EIFRRAIRIS ASSILCIHNH
PSGDPSPSPE DIAVTKRLVE AGRVLGIEVL DHIVIGDGRF VSLRAEGYLD STS