Gene Aaci_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1772 
Symbol 
ID8425287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1829298 
End bp1830137 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID645027882 
Producthemolysin A 
Protein accessionYP_003185173 
Protein GI258511739 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA CGAGGCTGGA TCTCCTGTTG GTGGCGAGGG GGCTGTATGC GAGCCGGGAA 
GCGGCGAGGC GCGCCATCAT GGCCGGGCTC GTGCGCGTCG ACGGCGTGCG CGCCGACAAG
CCGGGCTTCA AGGTCGCGGA AGACGCGCAC GTCGAGGTTG AGCGGCCCAG CCGCGAGTAC
GCATCGCGCG GCGGGTTGAA ACTGGAGCGC GCGCTCGACA CGTTCGGCAT TCCGGTGAAA
GACCGCGTCG CGATCGACGT TGGGGCGTCG ACGGGCGGGT TCACCGACTG CCTGTTGCAG
CGCGGCGCCC GGTTGGTTTA CGCGGTCGAC GTGGGCTACG GCCAGCTCGC GTGGCGACTG
CGCCAGGACG ATAGGGTGCG CGTGATGGAG CGCACCAACT TTCGCCATGT CGATGCGGCG
CGATTTGACC CACGGCCGGA TCTCGCCGTG ATGGACGTGT CCTTCATCTC CATTCGCCTT
TTGTTCCCCA AATTGTCTGA GGTCTGTCTC CCCGACGTCG ACATCATCTC GCTGATCAAG
CCTCAGTTCG AGGCCGGGCG GGATCGGGTG GGCAAAGGCG GCATCGTGCG CGATCCCGAG
GTTCATCGGG CCGTGCTCCT GGACATCCTG AAGAGTATCG AGTCCATGGG TTGGTGCTGC
CGCGGGCTCA CGTACTCGCC CATCACCGGT GGAGACGGCA ACGTCGAGTT TCTCGGCTGG
TTCCGCATGC ACCCGGATCC GGAGGAGACC ATGCGGTGGG TGACCGAGAG CCATCGGGTC
GTCGAGGCCG CATGGGCCCA CCTGAAGAGC AGCACGGACC CGAACGGGGG CGCGGAATGA
 
Protein sequence
MNKTRLDLLL VARGLYASRE AARRAIMAGL VRVDGVRADK PGFKVAEDAH VEVERPSREY 
ASRGGLKLER ALDTFGIPVK DRVAIDVGAS TGGFTDCLLQ RGARLVYAVD VGYGQLAWRL
RQDDRVRVME RTNFRHVDAA RFDPRPDLAV MDVSFISIRL LFPKLSEVCL PDVDIISLIK
PQFEAGRDRV GKGGIVRDPE VHRAVLLDIL KSIESMGWCC RGLTYSPITG GDGNVEFLGW
FRMHPDPEET MRWVTESHRV VEAAWAHLKS STDPNGGAE