Gene Aaci_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1746 
Symbol 
ID8425261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1806069 
End bp1806413 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID645027856 
Productanti-sigma-factor antagonist 
Protein accessionYP_003185147 
Protein GI258511713 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor
[TIGR02886] anti-sigma F factor antagonist 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGTGG AGACCAAGTT GGAGCGAGGG ATCGTGGTCA TCGAGCTGAA GGGAGAACTG 
GACCACCACG CGGTGGAACA AATGAGGGAT CGGATCGAAC AGCAGCTTGC GGAACACGGC
TACCGGGGCC TCGTGATGTC GTTTCGGAAC ATCGATTTTA TGGACAGTTC GGGCCTCGGC
CTGATTCTGG GCCGCTATCG AAGCGTCTCC GAGCACGGAG GCAAGATGGC GCTCTGTGAA
GTCAACCCGA CGTTGAGACG GCTCTTCGAA ATGTCCGGTT TGCTCAAGGT GATTCCCGTT
TACGACTCTG AAGAAGCTGC TGTGGCAGCG ATATTGGGAG CGTGA
 
Protein sequence
MSVETKLERG IVVIELKGEL DHHAVEQMRD RIEQQLAEHG YRGLVMSFRN IDFMDSSGLG 
LILGRYRSVS EHGGKMALCE VNPTLRRLFE MSGLLKVIPV YDSEEAAVAA ILGA