| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1432 |
|---|
| Symbol | |
|---|
| ID | 8424939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1484182 |
|---|
| End bp | 1485303 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645027547 |
|---|
| Product | NusA antitermination factor |
|---|
| Protein accession | YP_003184847 |
|---|
| Protein GI | 258511413 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000109855 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGG ATTTTCTGGA AGCGCTGGAC CAGTTGGCGC GCGAAAAAGG AATTGACAAG
GAAGTTCTGC TCGAGGCGAT TGAGGCGGCG CTCATCGCGA GCTACCGCCG CAACTTCCAC
TCGGCGGCCA ACGTGCGCGT GGAGGTGAAG CGAGACACGG GCGAGGTCCA CGTGTACGCG
CGCAAGACCG TCGTCGAGGA GCCGAAGGAC ACGCGCCTCG AGATCTCGCT AGACGCGGCG
CGCGACATCA ATCCAAGCTA TCAAATCGGA GATGTCGTGG AAATTGAGGT CACCCCTCGC
GACTTCGGGC GCATCGCCGC GCAGGCCGCC AAGCAGGTCG TCATGCAGCG CGTGAAGGAA
GCCGAGCGAT CCGTCATCTA CAGCAAGTTT GCGGATCGCG AGGAAGAGGT CGTGAGCGGG
ATCGTCAGCC GGCTCGAGCC GCGCGTCGCC TACATCGATC TCGGCGACAC GGAGGCGATT
TTGCCGCAGT CGGAACAGAT GGCGTCCGAC AAGCTGCAGG TCGGCAAGCG GCTCAAGGTG
TTCATCGCGC GCGTGGAGCG CACGTCGAAG GGCCCGCAGA TTGTGGTGTC CCGCACCCAT
CCGGGGCTTC TTCGCCGCTT GTTTGAACTC GAGGTGCCGG AAATTTACGA GGGCATCGTG
GAGATCAAGG CCGTGGCCCG CGAGGCGGGA TCGCGTTCCA AAATCGCGGT TCATTCGCGC
AATCCGGAGG TGGATCCCAT CGGCGCGTGC GTCGGCGCCC GGGGATCGCG CGTCCAGGCG
ATTGTGAACG AATTGAACGG GGAAAAGGTC GACATCGTGG AGTGGAGCGA AGATCCGGCG
ACGTTCGTGG CGAATGCGCT GTCTCCCGCG AAAGTGATCG ACGTGCACAT CTATGAGGAC
GAGCGCGTGG CGCGGACGGT GGTTCCGGAT TATCAACTGT CCCTGGCGAT TGGGAAGGAG
GGACAGAACG CCCGGCTTGC CGCGCGGCTC ACGGGCTGGA AGATCGACAT CAAGAGCGAG
TCGCAGATGG CCTCCCATTC GCTTCTCGAT CAGCTCGAGG ACACGAACGA GGAGGAACCC
GAGTTTGCCA CGCTGTCCGA CGACTGGCTG AACGAACCCT GA
|
|---|
| Protein sequence | MNVDFLEALD QLAREKGIDK EVLLEAIEAA LIASYRRNFH SAANVRVEVK RDTGEVHVYA
RKTVVEEPKD TRLEISLDAA RDINPSYQIG DVVEIEVTPR DFGRIAAQAA KQVVMQRVKE
AERSVIYSKF ADREEEVVSG IVSRLEPRVA YIDLGDTEAI LPQSEQMASD KLQVGKRLKV
FIARVERTSK GPQIVVSRTH PGLLRRLFEL EVPEIYEGIV EIKAVAREAG SRSKIAVHSR
NPEVDPIGAC VGARGSRVQA IVNELNGEKV DIVEWSEDPA TFVANALSPA KVIDVHIYED
ERVARTVVPD YQLSLAIGKE GQNARLAARL TGWKIDIKSE SQMASHSLLD QLEDTNEEEP
EFATLSDDWL NEP
|
|---|
| |