Gene Aaci_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1425 
Symbol 
ID8424932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1473490 
End bp1474641 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID645027540 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_003184840 
Protein GI258511406 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCA TCGCCATTCT GGGGAGCACG GGCACCATTG GGGTGCAGGC GCTCGAGGTG 
TTGTCGCAAC TGGATACATA CGAAGTCGTC GCTCTTGCGG CAGGGCGCAA CGTGGAGCGG 
TTGGCGGAAC AGATTCGCCA GTATCGCCCG AAGCTCGTCG GCGTGGCCGA CGAAGAGGCC 
CGGCGCGCGC TGCGCGAACT TGTGCCCGGA GAACGGGTGG ACATCGTCGT CGGAGACGAG 
GGGCTCGTCG CCTGCGCCGC GTATCCGTCG GATGTCGTGC TGAATGCGGT CGTGGGGGCT 
CGAGGCATTC TGCCCGCGCT GGCCGCGGTC GGCAGGGGTG CGCGGCTGGC GCTCGCCAAC 
AAGGAGTGCC TCGTGGCGGC CGGCGAGCTC ATCCTGCGCG CCATGCGCGA CGCAGGCGGC 
GAGATCGTGC CCGTGGACAG CGAGCACTGT GCGCTTCACC AGTGTCTGCG ATCCGGTCGC 
CCCGAGGAGG TCCTGCGGCT CGTCCTGACG GCGTCAGGCG GTCCGTTTCG ATCGTGGCCG 
AAAGCGCGCA TGGCGGAGGT CACCGTCCGA GATGCCCTGC GCCATCCGAA CTGGAACATG 
GGACAGAAGA TCACCATCGA CAGCGCCACG ATGATGAACA AGGGGCTCGA GGTGATTGAG 
GCGCATCATT TGTTCGCCGT GCCATATGAT AAGATAGCTG TGCTTGTACA TCCGGAGAGC 
ATCGTGCACT CCATGGTGGA GTTTGTGGAC GGCTCGATGG TGGCACAGCT CGCGACGGCC 
GACATGCGCT TGCCGATTCA ATACGCCATC ACCTATCCAG AGCGTCTTCC CGCGCCTTGG 
CCGCGGCTGA ACCTGGCGAG CGTTGGAGCG CTTCACTTCG AAGAGCCCGA TCTCGACAAG 
TTTCCGTGCC TGCGCTTGGC CATCGAGGCA GGCCGTGCGG GTGGCATCGC ACCTTGCGTT 
CTGAACGCGG CGAACGAAGT GGCGGTCGAC GCGTTTTTGC GCGAAAAGAT CCCGTTTTTG 
CGGATCCCTC AGGTCGTTCA GGCGGTGCTC GAACGCGTGC CGAACGAAGC GCCTCAGTCG 
GTCGACGATG TCCTTCGCGC GGATGGGCAA GCGCGGCGTC TGGCCGAACT CTACGTGGCA 
AAGGGCGGAT GA
 
Protein sequence
MKRIAILGST GTIGVQALEV LSQLDTYEVV ALAAGRNVER LAEQIRQYRP KLVGVADEEA 
RRALRELVPG ERVDIVVGDE GLVACAAYPS DVVLNAVVGA RGILPALAAV GRGARLALAN 
KECLVAAGEL ILRAMRDAGG EIVPVDSEHC ALHQCLRSGR PEEVLRLVLT ASGGPFRSWP 
KARMAEVTVR DALRHPNWNM GQKITIDSAT MMNKGLEVIE AHHLFAVPYD KIAVLVHPES 
IVHSMVEFVD GSMVAQLATA DMRLPIQYAI TYPERLPAPW PRLNLASVGA LHFEEPDLDK 
FPCLRLAIEA GRAGGIAPCV LNAANEVAVD AFLREKIPFL RIPQVVQAVL ERVPNEAPQS 
VDDVLRADGQ ARRLAELYVA KGG