| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1376 |
|---|
| Symbol | |
|---|
| ID | 8424883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1430911 |
|---|
| End bp | 1431810 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645027492 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_003184792 |
|---|
| Protein GI | 258511358 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC TGGTGAACAA GGAAACGCGC GTCATTACCC AGGGCATCAC GGGATCTGCC
GGTCTGTTTC ACACGCAGCA GGCGCTTGCC TACGGCACGA AGGTCGTGGG TGGCACCTCC
CCAGGGAAGG GCGGCACAAA GGTCGAGGGA TTGCCGGTCT TCAACACGGT TGAGGAGGCC
GTGCGCGAGA CGGGCGCAAA TGCGTCGGTC ATTTACGTTC CGCCTGCATT CGCCGCGGAC
GCCATCATGG AGGCCGTTGC GGCCGGAATC GAACTTGTCG TGTGCATCAC GGAAGGTATT
CCGATTCTTG ATATGGTGAA GGTCAAGCGG TACATGGAGG GCAAGAAGAC GCGGCTCATT
GGCCCGAACT GTCCTGGCGT GATCACGCCG AACGAGTGCA AGATCGGCAT CATGCCTGGA
TACATTCACA CGCCTGGAAA AATCGGCGTC GTGTCTCGCT CGGGAACGCT GACCTACGAA
GCCGTGTACC AGTTGACGCA GCTCGGGCTC GGCCAGTCGA CGGCCGTCGG GATCGGCGGC
GATCCGGTCA ACGGGACAAA CTTTGTCGAC GTGCTGAAGA TGTTCAACGA CGACCCGGAT
ACCGAAGCCG TGATCATGAT CGGCGAGATC GGTGGATCGG CGGAAGAAGA AGCGGCAGAG
TGGATTAAGG CCAACATGAA AAAGCCCGTC GTTGGCTTTA TCGCGGGTGC CACAGCCCCT
CCGGGAAGGC GGATGGGTCA TGCGGGGGCG ATTGTGTCCG GTGGTTCCGG CACGGCGCAG
TCCAAGATCG AGAAGATGAA GGCGTGCGGC ATCCGAGTGG CTCCCACCCC GTCTGAGATG
GGCTCGACGT TGTATCAGGT GCTGGAAGAG CGCGGCTTGC TCGAGCGCTG CAAGTCGTGA
|
|---|
| Protein sequence | MSILVNKETR VITQGITGSA GLFHTQQALA YGTKVVGGTS PGKGGTKVEG LPVFNTVEEA
VRETGANASV IYVPPAFAAD AIMEAVAAGI ELVVCITEGI PILDMVKVKR YMEGKKTRLI
GPNCPGVITP NECKIGIMPG YIHTPGKIGV VSRSGTLTYE AVYQLTQLGL GQSTAVGIGG
DPVNGTNFVD VLKMFNDDPD TEAVIMIGEI GGSAEEEAAE WIKANMKKPV VGFIAGATAP
PGRRMGHAGA IVSGGSGTAQ SKIEKMKACG IRVAPTPSEM GSTLYQVLEE RGLLERCKS
|
|---|
| |