Gene Aaci_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1342 
Symbol 
ID8424846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1394661 
End bp1395695 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID645027455 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_003184758 
Protein GI258511324 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACGA TGGCCGTGGA CGCGATGGGC GGCGACTACG CTCCGGAGGC CCCGATGGAA 
GCGCTGTGCC AGGCTGCGAC TCAGTACACC GACACGAAGT TCATCGTGAT CGGCGACGAG 
GCGCGGATTC GGGAGTTGGG AGGGGCGAGG CTGCCCGACA ATGTCGAGGT GCGCCACACC 
GACGTGGTGA TTGCGGGGGA CGAAGAACCC GTCAGGGCCG TACGGCGAAA GCCAAACTCG 
TCGCTCGTGA TGGCCGCCAC GTTGGTGGCG AACAAAGAGG CGGACGTGAT GGTCTCTGCA 
GGCAACACGG GGGCCATCAT GGCGGCGGGA ACGCTCATCA TCGGGCGCTT GCCCGGGGTG 
GAGCGGCCGG CTCTCGCTCC CATTTTGCCG ACGTTCGACG GGCGAGGGGT CCTGTTGCTC 
GACGCCGGCG CGACGATGGA CGCTTCGGCG GAAAACTTGT TGAGCTACGC GTACATGGCG 
GATGCTTACG TGCGTCACGT CTTGGATATC GAGAAGCCTC GCATCGCGCT GTTGAACGTG 
GGCACGGAGG ACTCCAAGGG CAACGCGGTT GTGAAGCAGG CCTTCGCGCT CTTGTCTCAG 
TCACCCTTGA ACTTTATTGG CAACATCGAG GCGCGCGAAA TGATGGCGGG ATGCGCCGAT 
GTCGTGGTCT GCGACGGGTT TGTCGGAAAC GTCGTACTGA AGTTGGCGGA GGGCATTGGC 
CTCGGCCTGT TTTCCGACAT CCGCACCGTC TTGACCCAGA CGATGAGCGG CAGACTCGCG 
GCGCTGCTTG TGGGGAAGCG GCTGCGCCAA ATGCGAGCTC GGTACGACTG GGCCGAGCAT 
GGCGGCGCGC CGTTCCTCGG CGTGAACGGC GGCTGTTTCA AAGCCCACGG CAGCAGCAAC 
GCGCGGGCGT GGTTCATGGC CATCACCCAG GCCCGAAAGT TCATCGCGAA CGATCTCCTG 
CACAAGCTGA CGGTGGCCAT GGGTGAACGG CACGTGTCCG TGCCGAATTC CGAACTCGGA 
GAGGGTCGAA CATGA
 
Protein sequence
MITMAVDAMG GDYAPEAPME ALCQAATQYT DTKFIVIGDE ARIRELGGAR LPDNVEVRHT 
DVVIAGDEEP VRAVRRKPNS SLVMAATLVA NKEADVMVSA GNTGAIMAAG TLIIGRLPGV 
ERPALAPILP TFDGRGVLLL DAGATMDASA ENLLSYAYMA DAYVRHVLDI EKPRIALLNV 
GTEDSKGNAV VKQAFALLSQ SPLNFIGNIE AREMMAGCAD VVVCDGFVGN VVLKLAEGIG 
LGLFSDIRTV LTQTMSGRLA ALLVGKRLRQ MRARYDWAEH GGAPFLGVNG GCFKAHGSSN 
ARAWFMAITQ ARKFIANDLL HKLTVAMGER HVSVPNSELG EGRT