Gene Aaci_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1339 
Symbol 
ID8424843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1393124 
End bp1393627 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID645027452 
Productprotein of unknown function DUF177 
Protein accessionYP_003184755 
Protein GI258511321 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.518128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCG ACGTGGAACG ATTGAAAGAA GAGGGCGAGC TCGATCTCGC CGAAATCGTG 
TCGCTGCCGC GCATCGCTCG GGAAGTGGTG GACATCGAAT CGCTGGACGA CGTCAACGTC 
CGCCTGCACG CGACCTATCA CCACCCCTAC GTGGTCGTGC GCGGCGAACT GGACACCGTG 
GTTCACTATG TGTGCGCCCG CTGTCTCGCG GAGTTCGCGC GTCCCTTGAG CGCGCCCTTT 
CATGAGCGAT ACACGACCGA CGAGCACAAG GCGGAGGACG AGGTGCGATT TGTCGGGGAC 
GAGATGGTGG ATGTCACGCC GGAACTGGAG CAGGCCATTT TTCTCGCCAT CGACAACCGC 
CCGCTCTGCA AGGAGACGTG TCAAGGCTTG TGTCCGGTGT GCGGGCGCGA TCGCAACGTG 
GAGGCGTGCG GCTGCGACGT GCGGCCCATC GATCCGAGGC TGGAGGCGCT GAAGGGCTTG 
CTTTCCGACC ATGGTTCGGA GTAA
 
Protein sequence
MNIDVERLKE EGELDLAEIV SLPRIAREVV DIESLDDVNV RLHATYHHPY VVVRGELDTV 
VHYVCARCLA EFARPLSAPF HERYTTDEHK AEDEVRFVGD EMVDVTPELE QAIFLAIDNR 
PLCKETCQGL CPVCGRDRNV EACGCDVRPI DPRLEALKGL LSDHGSE