Gene Aaci_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1322 
Symbol 
ID8424826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1376405 
End bp1377760 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content69% 
IMG OID645027436 
Productsun protein 
Protein accessionYP_003184739 
Protein GI258511305 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCTG AGGGCAGGCG GCGCGCGTAT CAGGCGCTCA TCCGGGTCGA ACGGGACGGG 
GCGTTTCTCA ACGCCGCCCT CCAGGAGGCG CTCGCGGGCG CAGGCGTGGA CGAACGAGAT
CGCGCGCTGG CCACCGAGAT CGCCTATGGT ACGCTGCGCC GACAGATCAC GCTCGACCGA
TTGCTGTCGC CGCTCGTGCG CCGGCCCATG TCGAAACTCG ATCCCGAGGT GCGCGTGATC
CTGCGCATGG GCGCGTACCA GATGACCTGG CTGAACCGCG TTCCGGCGTA CGCCGCGGCG
AACGACGCGG TCGAACTCGC CAAGCGGCAC CGTCCTCAGG CGGCCGCCCT CGTGAATGCG
GTGCTTCGCC GGTACGCCGA GCGCGCGCAA GATTGGGAAG ACCTCCTGAA CAAGGCCGTT
GCGGGGGCGA AGGACGTCGA GCGGTGGTCG GTGATGTACA GCGTGCCGGC TTGGATCGTG
GAGCGGCTCG TGGCGGATCA CGGAGCGGAT CGAGTCCTTG CGGCGCTCGC TTCGATGAAT
GAGCCGGCGC CGATGTCCCT GCGCGCCAAT CGCCTTCGCG GATCCCGCGA GGAGGCCATC
GCTCGATTGG GCGCGGAGGG CGCCGTGGCG AGGCCCGCCG CGCTCGCGGA GGACGGCCTG
CGCGTGCAGG GGCAGGTCGA CGTGACGCGC CTTCAGGCTT ACCGGGACGG CTACGTGACG
ATTCAGGACG AGGGCGCGAT GCTTGTGGCG CCGCTTCTTC GTCCGGAGCC TGGTATGCGC
GTGGTGGACC TTTGCGCGGC GCCAGGCGGC AAGACGACGC ACCTGGCCGA GCTGATGGGC
GATCGCGGCG AGATCGACGC CTATGACGTC ACCGTGGCGA AGGTTCGCGC CATCCGCCAA
CAGGCAGAGC GGCTTGGCCT GCAAAGCGTT CACCCGAGGC TCGGCGACGG CCGGCAGGTC
ACACCGGAAG GGCTGTACGA CGCGGCGCTC GTGGACGCGC CCTGCACCGG CCTTGGCGTC
ATGCGCCGTC GGCCGGACCT GCGATATCGG CGGCGCCCGG AGGACGTCGC GCAGTTGGCG
CAGCTTCAGC GGGCCTTGCT GCGCCGCGCG TGCGCCATCG TCCGATCCGG CGGCTGCGTC
GTGTACTCGA CGTGCACACT GTTGAAGGAG GAGAACGAGT CCGTCGTGCG CGACGTGGCC
TCCGATCCGT CTGTGGGCGT CCGCATCGAA GACATCGGAG GCGACTTGGC GCCGACGCTG
GCTGTGAGCG TCGGGGAGCG TTCGCCAGGT TTCCTGCTTT GGCCGGACTG GCACGAGACG
GACGGGTTTT TCATGGCGCG CCTGCGCCGA ATCTGA
 
Protein sequence
MIAEGRRRAY QALIRVERDG AFLNAALQEA LAGAGVDERD RALATEIAYG TLRRQITLDR 
LLSPLVRRPM SKLDPEVRVI LRMGAYQMTW LNRVPAYAAA NDAVELAKRH RPQAAALVNA
VLRRYAERAQ DWEDLLNKAV AGAKDVERWS VMYSVPAWIV ERLVADHGAD RVLAALASMN
EPAPMSLRAN RLRGSREEAI ARLGAEGAVA RPAALAEDGL RVQGQVDVTR LQAYRDGYVT
IQDEGAMLVA PLLRPEPGMR VVDLCAAPGG KTTHLAELMG DRGEIDAYDV TVAKVRAIRQ
QAERLGLQSV HPRLGDGRQV TPEGLYDAAL VDAPCTGLGV MRRRPDLRYR RRPEDVAQLA
QLQRALLRRA CAIVRSGGCV VYSTCTLLKE ENESVVRDVA SDPSVGVRIE DIGGDLAPTL
AVSVGERSPG FLLWPDWHET DGFFMARLRR I