Gene Aaci_1252 details

Gene Information

• Locus tag: Aaci_1252
• ID: 8424757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Kingdom: Bacteria
• Replicon accession: NC_013205
• Strand: +
• Start bp: 1305506
• End bp: 1306204
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 645027367
• Product: transcriptional regulator, GntR family
• Protein accession: YP_003184670
• Protein GI: 258511236
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.148319
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGCGGA ACGCCGGAGG GGAAAGGAGG CTCGGAGACG TCATTGCGGA CGTGCTTCGG 
AGGGAGATTG TGTGGGGCGA GTGGCCCAGT GGACATGTGT TCAGTGAAAA CGCGTTGGCG 
CGCCGATTCG GTACCAGCCG CTCGCCGGTA CGCGAGGCTC TGAGGCAGTT GGCACACGAG 
GGCCTGATTT CGCTCGGCCG GAACGGGGCG CGGGTCGTGG GGCTGGACCT TGGGGACGCG 
TTGGAACTGT ATGACGTCAG GAGTCTCATT GAGCAGTTCA CCGCGTCGCG CGTGTGTGAA 
CGGCCGCGCG CCGAGCGGGA ATCGCTCGCC CATACCCTTT CGACCCTCGT GTTGGCCATG 
GAAGAGGCGG CTTCCCGGAG GGACTGGCAG TCCTTTTCCG ATCTCGACCT CGCCTATCAC 
GATGCCATTG TACGCGCGGC AAACCATCGC CGCGTCCTGC GAATGTGGGA CGAGATGCGA 
AGCCTTGTAC AGCTCACGCT CGCGCTCGTC ATGCGCAAGC GGATGCAGCG CGGAGACGCT 
GACATGCGAG GCGCGCTCGC GCAGCATCGA AGTCTCGCGG AGGCCATCCT CGCCGGCGAC 
GCGGCGTGGG TGAGACGGGT GATGCAGTCC CACGTGGAGG AGACGCGCAG GTTGCTCGAG 
GGCGGATTGC GCGGGCACCC TGCGGGCGAC GAGCGCTGA 

 

Protein sequence

MRRNAGGERR LGDVIADVLR REIVWGEWPS GHVFSENALA RRFGTSRSPV REALRQLAHE 
GLISLGRNGA RVVGLDLGDA LELYDVRSLI EQFTASRVCE RPRAERESLA HTLSTLVLAM 
EEAASRRDWQ SFSDLDLAYH DAIVRAANHR RVLRMWDEMR SLVQLTLALV MRKRMQRGDA 
DMRGALAQHR SLAEAILAGD AAWVRRVMQS HVEETRRLLE GGLRGHPAGD ER